Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMD16635.1 | pyrC | TL18_00420 | TL18_09230 | Membrane-associated Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.414 |
| AMD16635.1 | pyrH | TL18_00420 | TL18_02825 | Membrane-associated Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.648 |
| AMD16635.1 | upp | TL18_00420 | TL18_03545 | Membrane-associated Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
| AMD17174.1 | AMD18224.1 | TL18_03540 | TL18_09460 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.805 |
| AMD17174.1 | carA | TL18_03540 | TL18_02395 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AMD17174.1 | pyrB | TL18_03540 | TL18_00125 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMD17174.1 | pyrC | TL18_03540 | TL18_09230 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.999 |
| AMD17174.1 | pyrD | TL18_03540 | TL18_09465 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. | 0.884 |
| AMD17174.1 | pyrE | TL18_03540 | TL18_07775 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.950 |
| AMD17174.1 | pyrF | TL18_03540 | TL18_03990 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.957 |
| AMD17174.1 | upp | TL18_03540 | TL18_03545 | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.929 |
| AMD18224.1 | AMD17174.1 | TL18_09460 | TL18_03540 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.805 |
| AMD18224.1 | carA | TL18_09460 | TL18_02395 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMD18224.1 | pyrB | TL18_09460 | TL18_00125 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AMD18224.1 | pyrC | TL18_09460 | TL18_09230 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.997 |
| AMD18224.1 | pyrD | TL18_09460 | TL18_09465 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. | 0.999 |
| AMD18224.1 | pyrE | TL18_09460 | TL18_07775 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.999 |
| AMD18224.1 | pyrF | TL18_09460 | TL18_03990 | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.999 |
| carA | AMD17174.1 | TL18_02395 | TL18_03540 | Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| carA | AMD18224.1 | TL18_02395 | TL18_09460 | Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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