Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMD16759.1 | AMD16760.1 | TL18_01105 | TL18_01110 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. | 0.879 |
| AMD16759.1 | eif2g | TL18_01105 | TL18_06080 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation initiation factor IF-2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.653 |
| AMD16759.1 | fusA | TL18_01105 | TL18_08700 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor EF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.478 |
| AMD16759.1 | infB | TL18_01105 | TL18_06090 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.529 |
| AMD16759.1 | pan | TL18_01105 | TL18_03225 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleotidase; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome associa [...] | 0.481 |
| AMD16759.1 | rfc | TL18_01105 | TL18_10170 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.484 |
| AMD16759.1 | tuf | TL18_01105 | TL18_08695 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.406 |
| AMD16760.1 | AMD16759.1 | TL18_01110 | TL18_01105 | ATPase AAA; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
| AMD16760.1 | rfc | TL18_01110 | TL18_10170 | ATPase AAA; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.451 |
| AMD16815.1 | AMD17636.1 | TL18_01410 | TL18_06150 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TCP-1 chaperonin family. | 0.497 |
| AMD16815.1 | AMD17937.1 | TL18_01410 | TL18_07805 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TCP-1 chaperonin family. | 0.485 |
| AMD16815.1 | AMD18332.1 | TL18_01410 | TL18_10120 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arsenic ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.664 |
| AMD16815.1 | infB | TL18_01410 | TL18_06090 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.426 |
| AMD16815.1 | pan | TL18_01410 | TL18_03225 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleotidase; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome associa [...] | 0.664 |
| AMD16815.1 | rfc | TL18_01410 | TL18_10170 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.628 |
| AMD16815.1 | rfcL | TL18_01410 | TL18_10175 | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.562 |
| AMD17636.1 | AMD16815.1 | TL18_06150 | TL18_01410 | Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TCP-1 chaperonin family. | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| AMD17636.1 | eif2g | TL18_06150 | TL18_06080 | Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TCP-1 chaperonin family. | Translation initiation factor IF-2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.718 |
| AMD17636.1 | fusA | TL18_06150 | TL18_08700 | Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TCP-1 chaperonin family. | Elongation factor EF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.777 |
| AMD17636.1 | infB | TL18_06150 | TL18_06090 | Thermosome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TCP-1 chaperonin family. | Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.790 |
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