STRINGSTRING
AMD17397.1 AMD17397.1 AMD17451.1 AMD17451.1 AMD17757.1 AMD17757.1 AMD17761.1 AMD17761.1 AMD16614.1 AMD16614.1 AMD16615.1 AMD16615.1 AMD16988.1 AMD16988.1 AMD17079.1 AMD17079.1 AMD17235.1 AMD17235.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMD17397.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
AMD17451.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
AMD17757.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
AMD17761.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
AMD16614.1Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
AMD16615.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (186 aa)
AMD16988.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
AMD17079.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
AMD17235.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
Your Current Organism:
Methanobrevibacter sp. YE315
NCBI taxonomy Id: 1609968
Other names: M. sp. YE315
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