Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMD16579.1 | AMD16952.1 | TL18_00130 | TL18_02285 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MCM family. | 0.987 |
| AMD16579.1 | AMD16959.1 | TL18_00130 | TL18_02320 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | ATP-dependent helicase; Hel112; monomeric form of the enzyme from Sulfolobus shows 3'-5' ATP-dependent helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |
| AMD16579.1 | pan | TL18_00130 | TL18_03225 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | Nucleotidase; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome associa [...] | 0.433 |
| AMD16579.1 | radA | TL18_00130 | TL18_00365 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.714 |
| AMD16579.1 | radB | TL18_00130 | TL18_01600 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | DNA repair protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. | 0.443 |
| AMD16579.1 | rfc | TL18_00130 | TL18_10170 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.597 |
| AMD16579.1 | rfcL | TL18_00130 | TL18_10175 | Cell division control protein Cdc6; Involved in regulation of DNA replication. | ATPase AAA; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.455 |
| AMD16726.1 | AMD16727.1 | TL18_00930 | TL18_00935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.829 |
| AMD16726.1 | AMD16815.1 | TL18_00930 | TL18_01410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.563 |
| AMD16726.1 | AMD17583.1 | TL18_00930 | TL18_05845 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
| AMD16726.1 | AMD17731.1 | TL18_00930 | TL18_06670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
| AMD16726.1 | AMD18444.1 | TL18_00930 | TL18_04690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| AMD16726.1 | cbiO | TL18_00930 | TL18_04010 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.428 |
| AMD16726.1 | glnQ | TL18_00930 | TL18_04830 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.585 |
| AMD16727.1 | AMD16726.1 | TL18_00935 | TL18_00930 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.829 |
| AMD16727.1 | AMD16815.1 | TL18_00935 | TL18_01410 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CdcH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| AMD16727.1 | AMD17583.1 | TL18_00935 | TL18_05845 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.524 |
| AMD16727.1 | AMD17731.1 | TL18_00935 | TL18_06670 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.538 |
| AMD16727.1 | AMD18444.1 | TL18_00935 | TL18_04690 | Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| AMD16790.1 | AMD16952.1 | TL18_01275 | TL18_02285 | ATPase AAA; Involved in regulation of DNA replication. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MCM family. | 0.985 |
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