Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMD16819.1 | AMD16922.1 | TL18_01435 | TL18_02105 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| AMD16819.1 | AMD16924.1 | TL18_01435 | TL18_02120 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of pyruvate to form acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| AMD16819.1 | AMD17460.1 | TL18_01435 | TL18_05160 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 0.522 |
| AMD16819.1 | AMD18104.1 | TL18_01435 | TL18_08815 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Catalyzes the ferredoxin-dependent oxidative decarboxylation 2-oxoglutarate forming succinyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| AMD16819.1 | AMD18105.1 | TL18_01435 | TL18_08820 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| AMD16819.1 | AMD18106.1 | TL18_01435 | TL18_08825 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| AMD16819.1 | AMD18423.1 | TL18_01435 | TL18_02115 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| AMD16819.1 | porA | TL18_01435 | TL18_02110 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| AMD16819.1 | sucC | TL18_01435 | TL18_08810 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.605 |
| AMD16819.1 | sucD | TL18_01435 | TL18_06180 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.523 |
| AMD16919.1 | AMD16922.1 | TL18_02090 | TL18_02105 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.826 |
| AMD16919.1 | AMD16924.1 | TL18_02090 | TL18_02120 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of pyruvate to form acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
| AMD16919.1 | AMD17018.1 | TL18_02090 | TL18_02645 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| AMD16919.1 | AMD17460.1 | TL18_02090 | TL18_05160 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 0.962 |
| AMD16919.1 | AMD17887.1 | TL18_02090 | TL18_07530 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AMD16919.1 | AMD18107.1 | TL18_02090 | TL18_08835 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.982 |
| AMD16919.1 | AMD18423.1 | TL18_02090 | TL18_02115 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.662 |
| AMD16919.1 | porA | TL18_02090 | TL18_02110 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.818 |
| AMD16919.1 | sucC | TL18_02090 | TL18_08810 | Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.454 |
| AMD16922.1 | AMD16819.1 | TL18_02105 | TL18_01435 | 2-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
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