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AMD16626.1 AMD16626.1 glyA glyA AMD16716.1 AMD16716.1 AMD18407.1 AMD18407.1 AMD16725.1 AMD16725.1 AMD16731.1 AMD16731.1 AMD16732.1 AMD16732.1 AMD16733.1 AMD16733.1 AMD16734.1 AMD16734.1 AMD16735.1 AMD16735.1 AMD16736.1 AMD16736.1 AMD16737.1 AMD16737.1 AMD16738.1 AMD16738.1 leuC-2 leuC-2 aksA aksA AMD16756.1 AMD16756.1 apgM apgM fbp fbp AMD18415.1 AMD18415.1 AMD16856.1 AMD16856.1 AMD16858.1 AMD16858.1 AMD16859.1 AMD16859.1 AMD16860.1 AMD16860.1 AMD18416.1 AMD18416.1 AMD16914.1 AMD16914.1 AMD16915.1 AMD16915.1 AMD16916.1 AMD16916.1 AMD16917.1 AMD16917.1 AMD16921.1 AMD16921.1 AMD16922.1 AMD16922.1 porA porA AMD18423.1 AMD18423.1 AMD16924.1 AMD16924.1 mer mer AMD17009.1 AMD17009.1 AMD17035.1 AMD17035.1 AMD17104.1 AMD17104.1 AMD17147.1 AMD17147.1 AMD17169.1 AMD17169.1 mfnB mfnB AMD17280.1 AMD17280.1 mch mch AMD17460.1 AMD17460.1 aroA aroA cofH cofH AMD17511.1 AMD17511.1 AMD17512.1 AMD17512.1 AMD17514.1 AMD17514.1 AMD17515.1 AMD17515.1 AMD17516.1 AMD17516.1 AMD17518.1 AMD17518.1 AMD17575.1 AMD17575.1 cofC cofC eno eno AMD17895.1 AMD17895.1 AMD17906.1 AMD17906.1 AMD17907.1 AMD17907.1 hacB hacB AMD17961.1 AMD17961.1 AMD17962.1 AMD17962.1 mtrA mtrA AMD18161.1 AMD18161.1 cofD cofD AMD18164.1 AMD18164.1 mfnA mfnA AMD18176.1 AMD18176.1 AMD18182.1 AMD18182.1 AMD18183.1 AMD18183.1 AMD18184.1 AMD18184.1 AMD18189.1 AMD18189.1 mtrG mtrG AMD18191.1 AMD18191.1 mtrA-2 mtrA-2 mtrB mtrB mtrC mtrC mtrD mtrD mtrE mtrE AMD18197.1 AMD18197.1 AMD18198.1 AMD18198.1 AMD18199.1 AMD18199.1 AMD18200.1 AMD18200.1 AMD18201.1 AMD18201.1 AMD18205.1 AMD18205.1 cofG cofG AMD18221.1 AMD18221.1 ftr ftr AMD18289.1 AMD18289.1 AMD18290.1 AMD18290.1 AMD18291.1 AMD18291.1 AMD18292.1 AMD18292.1 mtd mtd fae-hps fae-hps
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMD16626.1Disulfide reductase; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (661 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. (423 aa)
AMD16716.16-phospho 3-hexuloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
AMD18407.1Formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
AMD16725.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
AMD16731.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
AMD16732.1tRNA CCA-pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
AMD16733.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
AMD16734.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
AMD16735.1Formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
AMD16736.1Formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
AMD16737.1Protein fwdA; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
AMD16738.1Formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
leuC-23-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (417 aa)
aksATrans-homoaconitate synthase; In Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family. (389 aa)
AMD16756.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)
apgMPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (412 aa)
fbpFructose 1,6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). (365 aa)
AMD18415.1Methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reduction of methenyltetrahydromethanopterin to methylenetetrahydromethanopterin; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
AMD16856.1Methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reduction of methenyltetrahydromethanopterin to methylenetetrahydromethanopterin; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
AMD16858.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
AMD16859.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
AMD16860.1Methyl-viologen-reducing hydrogenase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
AMD18416.1Delta 1-pyrroline-5-carboxylate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
AMD16914.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
AMD16915.1Tributyrin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AMD16916.1Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
AMD16917.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. (495 aa)
AMD16921.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
AMD16922.12-ketoisovalerate ferredoxin oxidoreductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
porAPyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
AMD18423.1Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
AMD16924.1Pyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of pyruvate to form acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
merMethylene-tetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. (318 aa)
AMD17009.1D-3-phosphoglycerate dehydrogenase; Catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (524 aa)
AMD17035.1Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AMD17104.1Isocitrate dehydrogenase; Catalyzes the formation of 2-oxoglutarate from isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
AMD17147.1acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
AMD17169.1Formylmethanofuran--tetrahydromethanopterin formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
mfnBHypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). (237 aa)
AMD17280.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
mchN(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (323 aa)
AMD17460.1Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. (323 aa)
aroAFructose-bisphosphate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. (263 aa)
cofHFO synthase subunit 2; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine. (372 aa)
AMD17511.1Sulfopyruvate decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
AMD17512.1Sulfopyruvate decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
AMD17514.1Disulfide reductase; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (769 aa)
AMD17515.1Heterodisulfide reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
AMD17516.1Heterodisulfide reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
AMD17518.1Phosphosulfolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
AMD17575.1Phosphoglycerate mutase; Catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
cofC2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. (223 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (414 aa)
AMD17895.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
AMD17906.1Disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
AMD17907.1Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
hacB3-isopropylmalate dehydratase; Hydro-lyase with broad substrate specificity for cis- unsaturated tricarboxylic acids. Catalyzes both the reversible dehydration of (R)-homocitrate ((R)-2-hydroxybutane-1,2,4- tricarboxylate) to produce cis-homoaconitate ((Z)-but-1-ene-1,2,4- tricarboxylate), and its hydration to homoisocitrate ((1R,2S)-1- hydroxybutane-1,2,4-tricarboxylate). Is also able to hydrate the analogous longer chain substrates cis-homo(2)-aconitate, cis-homo(3)- aconitate. All these reactions are part of the biosynthesis pathway of coenzyme B; Belongs to the LeuD family. LeuD ty [...] (160 aa)
AMD17961.1H4MPT-linked C1 transfer pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
AMD17962.1Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
mtrAHypothetical protein; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (186 aa)
AMD18161.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
cofDLPPG:FO 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. (301 aa)
AMD18164.1Coenzyme F420:L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
mfnAL-tyrosine decarboxylase; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis; Belongs to the group II decarboxylase family. MfnA subfamily. (385 aa)
AMD18176.1Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (758 aa)
AMD18182.1F420-nonreducing hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (475 aa)
AMD18183.1F420-nonreducing hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
AMD18184.1Methyl-viologen-reducing hydrogenase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
AMD18189.1Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of mtrA; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
mtrGTetrahydromethanopterin S-methyltransferase subunit G; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (78 aa)
AMD18191.1Tetrahydromethanopterin S-methyltransferase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)
mtrA-2Tetrahydromethanopterin S-methyltransferase subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (238 aa)
mtrBTetrahydromethanopterin S-methyltransferase subunit B; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (109 aa)
mtrCTetrahydromethanopterin S-methyltransferase subunit C; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (271 aa)
mtrDTetrahydromethanopterin S-methyltransferase subunit D; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (230 aa)
mtrETetrahydromethanopterin S-methyltransferase subunit E; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (292 aa)
AMD18197.1Methyl-coenzyme M reductase; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. (551 aa)
AMD18198.1Methyl-coenzyme M reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
AMD18199.1Methyl-coenzyme M reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
AMD18200.1Methyl-coenzyme M reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
AMD18201.1Methyl-coenzyme M reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
AMD18205.12-phosphosulfolactate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
cofGFO synthase subunit 1; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil. (363 aa)
AMD18221.1Sulfolactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
ftrFormylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. (295 aa)
AMD18289.1Coenzyme F420-reducing hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
AMD18290.1Coenzyme F420 hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AMD18291.1Coenzyme F420 hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
AMD18292.1Coenzyme F420 hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (404 aa)
mtdMethylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (276 aa)
fae-hpsBifunctional formaldehyde-activating protein/3-hexulose-6-phosphate synthase; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family. (413 aa)
Your Current Organism:
Methanobrevibacter sp. YE315
NCBI taxonomy Id: 1609968
Other names: M. sp. YE315
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