(12 nodes) Cholinesterase, and Glycerophosphodiester phosphodiesterase domain network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cni-ace-1	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (620 aa)
	Cni-gpcp-1	Uncharacterized protein. (717 aa)
	B9Z55_018921	GP-PDE domain-containing protein. (330 aa)
	Cni-T12B3.3	GP-PDE domain-containing protein. (356 aa)
	Cni-cha-1	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (473 aa)
	Cni-Y39A1A.22	Uncharacterized protein. (855 aa)
	Cni-gpcp-2	Uncharacterized protein. (805 aa)
	Cni-M110.7	Uncharacterized protein. (1090 aa)
	B9Z55_005948	Uncharacterized protein. (533 aa)
	B9Z55_005947	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (604 aa)
	Cni-ath-1	Abhydrolase_2 domain-containing protein. (310 aa)
	Cni-ace-2	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (594 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_005947	B9Z55_018921	A0A2G5V3T7	A0A2G5TGC9	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	GP-PDE domain-containing protein.	0.539
B9Z55_005947	Cni-T12B3.3	A0A2G5V3T7	A0A2G5U387	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	GP-PDE domain-containing protein.	0.539
B9Z55_005947	Cni-Y39A1A.22	A0A2G5V3T7	A0A2G5USW1	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Uncharacterized protein.	0.707
B9Z55_005947	Cni-ace-1	A0A2G5V3T7	A0A2G5SKJ2	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.876
B9Z55_005947	Cni-ace-2	A0A2G5V3T7	A0A2G5VVY8	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.872
B9Z55_005947	Cni-cha-1	A0A2G5V3T7	A0A2G5U8W7	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.402
B9Z55_005947	Cni-gpcp-1	A0A2G5V3T7	A0A2G5SRR0	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Uncharacterized protein.	0.834
B9Z55_005947	Cni-gpcp-2	A0A2G5V3T7	A0A2G5UXF1	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	Uncharacterized protein.	0.872
B9Z55_005948	B9Z55_018921	A0A2G5V316	A0A2G5TGC9	Uncharacterized protein.	GP-PDE domain-containing protein.	0.539
B9Z55_005948	Cni-T12B3.3	A0A2G5V316	A0A2G5U387	Uncharacterized protein.	GP-PDE domain-containing protein.	0.539
B9Z55_005948	Cni-Y39A1A.22	A0A2G5V316	A0A2G5USW1	Uncharacterized protein.	Uncharacterized protein.	0.707
B9Z55_005948	Cni-ace-1	A0A2G5V316	A0A2G5SKJ2	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.956
B9Z55_005948	Cni-ace-2	A0A2G5V316	A0A2G5VVY8	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.956
B9Z55_005948	Cni-cha-1	A0A2G5V316	A0A2G5U8W7	Uncharacterized protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.461
B9Z55_005948	Cni-gpcp-1	A0A2G5V316	A0A2G5SRR0	Uncharacterized protein.	Uncharacterized protein.	0.926
B9Z55_005948	Cni-gpcp-2	A0A2G5V316	A0A2G5UXF1	Uncharacterized protein.	Uncharacterized protein.	0.956
B9Z55_018921	B9Z55_005947	A0A2G5TGC9	A0A2G5V3T7	GP-PDE domain-containing protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.539
B9Z55_018921	B9Z55_005948	A0A2G5TGC9	A0A2G5V316	GP-PDE domain-containing protein.	Uncharacterized protein.	0.539
B9Z55_018921	Cni-M110.7	A0A2G5TGC9	A0A2G5UXW7	GP-PDE domain-containing protein.	Uncharacterized protein.	0.673
B9Z55_018921	Cni-Y39A1A.22	A0A2G5TGC9	A0A2G5USW1	GP-PDE domain-containing protein.	Uncharacterized protein.	0.760

page 1 of 6

Server load: low (10%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About