(7 nodes) Dopamine Neurotransmitter Release Cycle, and L27 domain, C-terminal network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9Z55_025080	Uncharacterized protein; Belongs to the MAGUK family. (689 aa)
	B9Z55_025079	Protein kinase domain-containing protein. (420 aa)
	B9Z55_011495	Uncharacterized protein. (978 aa)
	Cni-Y54G11A.17	Uncharacterized protein. (142 aa)
	Cni-lin-7	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (208 aa)
	B9Z55_000158	Uncharacterized protein. (635 aa)
	B9Z55_000157	Uncharacterized protein. (389 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_000157	B9Z55_011495	A0A2G5VGC9	A0A2G5UKL8	Uncharacterized protein.	Uncharacterized protein.	0.998
B9Z55_000157	B9Z55_025079	A0A2G5VGC9	A0A2G5SX68	Uncharacterized protein.	Protein kinase domain-containing protein.	0.998
B9Z55_000157	B9Z55_025080	A0A2G5VGC9	A0A2G5SWU5	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.998
B9Z55_000157	Cni-Y54G11A.17	A0A2G5VGC9	A0A2G5UYV6	Uncharacterized protein.	Uncharacterized protein.	0.804
B9Z55_000157	Cni-lin-7	A0A2G5VGC9	A0A2G5UZ38	Uncharacterized protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.929
B9Z55_000158	B9Z55_011495	A0A2G5VGB9	A0A2G5UKL8	Uncharacterized protein.	Uncharacterized protein.	0.998
B9Z55_000158	B9Z55_025079	A0A2G5VGB9	A0A2G5SX68	Uncharacterized protein.	Protein kinase domain-containing protein.	0.998
B9Z55_000158	B9Z55_025080	A0A2G5VGB9	A0A2G5SWU5	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.998
B9Z55_000158	Cni-Y54G11A.17	A0A2G5VGB9	A0A2G5UYV6	Uncharacterized protein.	Uncharacterized protein.	0.804
B9Z55_000158	Cni-lin-7	A0A2G5VGB9	A0A2G5UZ38	Uncharacterized protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.929
B9Z55_011495	B9Z55_000157	A0A2G5UKL8	A0A2G5VGC9	Uncharacterized protein.	Uncharacterized protein.	0.998
B9Z55_011495	B9Z55_000158	A0A2G5UKL8	A0A2G5VGB9	Uncharacterized protein.	Uncharacterized protein.	0.998
B9Z55_011495	B9Z55_025079	A0A2G5UKL8	A0A2G5SX68	Uncharacterized protein.	Protein kinase domain-containing protein.	0.977
B9Z55_011495	B9Z55_025080	A0A2G5UKL8	A0A2G5SWU5	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.951
B9Z55_011495	Cni-Y54G11A.17	A0A2G5UKL8	A0A2G5UYV6	Uncharacterized protein.	Uncharacterized protein.	0.995
B9Z55_011495	Cni-lin-7	A0A2G5UKL8	A0A2G5UZ38	Uncharacterized protein.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.995
B9Z55_025079	B9Z55_000157	A0A2G5SX68	A0A2G5VGC9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.998
B9Z55_025079	B9Z55_000158	A0A2G5SX68	A0A2G5VGB9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.998
B9Z55_025079	B9Z55_011495	A0A2G5SX68	A0A2G5UKL8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.977
B9Z55_025079	B9Z55_025080	A0A2G5SX68	A0A2G5SWU5	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.994

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About