(10 nodes) Mixed, incl. NSF attachment protein, and Zinc finger, FLYWCH-type network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cni-syx-6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (122 aa)
	Cni-snap-1	Uncharacterized protein. (246 aa)
	Cni-snb-2	V-SNARE coiled-coil homology domain-containing protein. (121 aa)
	B9Z55_021961	TPR_REGION domain-containing protein. (296 aa)
	Cni-vti-1	t-SNARE coiled-coil homology domain-containing protein. (221 aa)
	Cni-flh-3	FLYWCH-type domain-containing protein. (430 aa)
	Cni-flh-1	Uncharacterized protein. (857 aa)
	Cni-syx-16	t-SNARE coiled-coil homology domain-containing protein. (326 aa)
	Cni-ykt-6	Uncharacterized protein; Belongs to the synaptobrevin family. (217 aa)
	Cni-syx-7	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (244 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_021961	Cni-flh-1	A0A2G5TU81	A0A2G5U070	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.916
B9Z55_021961	Cni-flh-3	A0A2G5TU81	A0A2G5TZN6	TPR_REGION domain-containing protein.	FLYWCH-type domain-containing protein.	0.916
B9Z55_021961	Cni-snap-1	A0A2G5TU81	A0A2G5T5P0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.937
B9Z55_021961	Cni-snb-2	A0A2G5TU81	A0A2G5TG43	TPR_REGION domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.883
B9Z55_021961	Cni-syx-16	A0A2G5TU81	A0A2G5UIS6	TPR_REGION domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.838
B9Z55_021961	Cni-syx-6	A0A2G5TU81	A0A2G5SS00	TPR_REGION domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.919
B9Z55_021961	Cni-syx-7	A0A2G5TU81	A0A2G5VJD4	TPR_REGION domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.915
B9Z55_021961	Cni-vti-1	A0A2G5TU81	A0A2G5TX93	TPR_REGION domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.934
B9Z55_021961	Cni-ykt-6	A0A2G5TU81	A0A2G5UM62	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.854
Cni-flh-1	B9Z55_021961	A0A2G5U070	A0A2G5TU81	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.916
Cni-flh-1	Cni-flh-3	A0A2G5U070	A0A2G5TZN6	Uncharacterized protein.	FLYWCH-type domain-containing protein.	0.591
Cni-flh-1	Cni-snap-1	A0A2G5U070	A0A2G5T5P0	Uncharacterized protein.	Uncharacterized protein.	0.950
Cni-flh-1	Cni-snb-2	A0A2G5U070	A0A2G5TG43	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.871
Cni-flh-1	Cni-syx-16	A0A2G5U070	A0A2G5UIS6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.778
Cni-flh-1	Cni-syx-6	A0A2G5U070	A0A2G5SS00	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.906
Cni-flh-1	Cni-syx-7	A0A2G5U070	A0A2G5VJD4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.909
Cni-flh-1	Cni-vti-1	A0A2G5U070	A0A2G5TX93	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.863
Cni-flh-1	Cni-ykt-6	A0A2G5U070	A0A2G5UM62	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.848
Cni-flh-3	B9Z55_021961	A0A2G5TZN6	A0A2G5TU81	FLYWCH-type domain-containing protein.	TPR_REGION domain-containing protein.	0.916
Cni-flh-3	Cni-flh-1	A0A2G5TZN6	A0A2G5U070	FLYWCH-type domain-containing protein.	Uncharacterized protein.	0.591

page 1 of 5

Server load: low (14%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About