(20 nodes) Exocytic process, and Norepinephrine Neurotransmitter Release Cycle network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cni-syd-2	Uncharacterized protein. (1162 aa)
	Cni-aex-4	Uncharacterized protein. (234 aa)
	Cni-syx-3	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (305 aa)
	Cni-unc-10	Uncharacterized protein. (2198 aa)
	Cni-unc-18	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (590 aa)
	Cni-syx-2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (309 aa)
	Cni-ric-4	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (235 aa)
	B9Z55_013849	Uncharacterized protein. (5404 aa)
	Cni-T07A9.10	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (560 aa)
	B9Z55_010415	V-SNARE coiled-coil homology domain-containing protein. (116 aa)
	Cni-unc-64	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (293 aa)
	B9Z55_008434	Uncharacterized protein. (1176 aa)
	Cni-mltn-9	Uncharacterized protein. (735 aa)
	Cni-snt-1	Uncharacterized protein. (443 aa)
	Cni-rab-3	Uncharacterized protein. (219 aa)
	B9Z55_006288	Uncharacterized protein. (75 aa)
	B9Z55_001808	C2 domain-containing protein. (665 aa)
	Cni-unc-13	Uncharacterized protein. (1525 aa)
	Cni-syx-4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (293 aa)
	Cni-cpx-1	Uncharacterized protein. (143 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_001808	B9Z55_006288	A0A2G5VHG6	A0A2G5V4J0	C2 domain-containing protein.	Uncharacterized protein.	0.760
B9Z55_001808	B9Z55_008434	A0A2G5VHG6	A0A2G5UMP8	C2 domain-containing protein.	Uncharacterized protein.	0.795
B9Z55_001808	B9Z55_010415	A0A2G5VHG6	A0A2G5UFR0	C2 domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.739
B9Z55_001808	B9Z55_013849	A0A2G5VHG6	A0A2G5U3H4	C2 domain-containing protein.	Uncharacterized protein.	0.905
B9Z55_001808	Cni-T07A9.10	A0A2G5VHG6	A0A2G5UDW0	C2 domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.814
B9Z55_001808	Cni-aex-4	A0A2G5VHG6	A0A2G5SSC0	C2 domain-containing protein.	Uncharacterized protein.	0.715
B9Z55_001808	Cni-cpx-1	A0A2G5VHG6	A0A2G5VU45	C2 domain-containing protein.	Uncharacterized protein.	0.715
B9Z55_001808	Cni-mltn-9	A0A2G5VHG6	A0A2G5UZC3	C2 domain-containing protein.	Uncharacterized protein.	0.804
B9Z55_001808	Cni-rab-3	A0A2G5VHG6	A0A2G5V4H5	C2 domain-containing protein.	Uncharacterized protein.	0.760
B9Z55_001808	Cni-ric-4	A0A2G5VHG6	A0A2G5TIP5	C2 domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.819
B9Z55_001808	Cni-snt-1	A0A2G5VHG6	A0A2G5V0L2	C2 domain-containing protein.	Uncharacterized protein.	0.805
B9Z55_001808	Cni-syd-2	A0A2G5VHG6	A0A2G5SQB7	C2 domain-containing protein.	Uncharacterized protein.	0.835
B9Z55_001808	Cni-syx-2	A0A2G5VHG6	A0A2G5T2I2	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.804
B9Z55_001808	Cni-syx-3	A0A2G5VHG6	A0A2G5STM2	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.704
B9Z55_001808	Cni-syx-4	A0A2G5VHG6	A0A2G5VSV8	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.704
B9Z55_001808	Cni-unc-10	A0A2G5VHG6	A0A2G5SW33	C2 domain-containing protein.	Uncharacterized protein.	0.999
B9Z55_001808	Cni-unc-13	A0A2G5VHG6	A0A2G5VHJ2	C2 domain-containing protein.	Uncharacterized protein.	0.824
B9Z55_001808	Cni-unc-18	A0A2G5VHG6	A0A2G5SWD6	C2 domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.814
B9Z55_001808	Cni-unc-64	A0A2G5VHG6	A0A2G5UJC8	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.875
B9Z55_006288	B9Z55_001808	A0A2G5V4J0	A0A2G5VHG6	Uncharacterized protein.	C2 domain-containing protein.	0.760

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