(28 nodes) O-glycosylation of TSR domain-containing proteins, and Basement membrane network (Caenorhabditis nigoni)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cni-F59B2.12	Uncharacterized protein. (924 aa)
	Cni-let-2	Collagen IV NC1 domain-containing protein. (1791 aa)
	Cni-dgn-1	Peptidase S72 domain-containing protein. (590 aa)
	Cni-C15C7.7	Uncharacterized protein. (392 aa)
	Cni-F09F9.4	Uncharacterized protein. (673 aa)
	Cni-T19D2.1	Peptidase M12B domain-containing protein. (974 aa)
	Cni-ddr-1	Uncharacterized protein. (768 aa)
	Cni-lam-2	Uncharacterized protein. (1633 aa)
	Cni-adt-2	Peptidase M12B domain-containing protein. (1026 aa)
	Cni-mig-6	Uncharacterized protein. (1828 aa)
	Cni-grd-8	Uncharacterized protein. (423 aa)
	Cni-mig-17	Peptidase M12B domain-containing protein. (457 aa)
	Cni-nid-1	Uncharacterized protein. (1581 aa)
	Cni-ZC250.2	Uncharacterized protein. (508 aa)
	Cni-VC5.2	Uncharacterized protein. (515 aa)
	B9Z55_013219	Fibulin-1; Belongs to the fibulin family. (800 aa)
	Cni-lam-1	Uncharacterized protein. (1873 aa)
	B9Z55_013222	Uncharacterized protein. (323 aa)
	Cni-gon-1	Uncharacterized protein. (2149 aa)
	Cni-epi-1	Uncharacterized protein. (3777 aa)
	B9Z55_010527	Uncharacterized protein. (1061 aa)
	Cni-emb-9	Collagen IV NC1 domain-containing protein. (1759 aa)
	Cni-mig-18	Uncharacterized protein. (228 aa)
	Cni-pad-2	Uncharacterized protein. (426 aa)
	Cni-spon-1	Uncharacterized protein. (833 aa)
	Cni-lam-3	Uncharacterized protein. (3108 aa)
	Cni-madd-4	Ig-like domain-containing protein. (1021 aa)
	B9Z55_002226	Uncharacterized protein. (884 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_002226	B9Z55_013219	A0A2G5VJQ0	A0A2G5U108	Uncharacterized protein.	Fibulin-1; Belongs to the fibulin family.	0.604
B9Z55_002226	B9Z55_013222	A0A2G5VJQ0	A0A2G5U1N7	Uncharacterized protein.	Uncharacterized protein.	0.604
B9Z55_002226	Cni-VC5.2	A0A2G5VJQ0	A0A2G5TKP9	Uncharacterized protein.	Uncharacterized protein.	0.630
B9Z55_002226	Cni-ddr-1	A0A2G5VJQ0	A0A2G5STQ3	Uncharacterized protein.	Uncharacterized protein.	0.542
B9Z55_002226	Cni-dgn-1	A0A2G5VJQ0	A0A2G5SQ05	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.604
B9Z55_002226	Cni-emb-9	A0A2G5VJQ0	A0A2G5UHM5	Uncharacterized protein.	Collagen IV NC1 domain-containing protein.	0.537
B9Z55_002226	Cni-epi-1	A0A2G5VJQ0	A0A2G5U8C8	Uncharacterized protein.	Uncharacterized protein.	0.592
B9Z55_002226	Cni-lam-3	A0A2G5VJQ0	A0A2G5VIR2	Uncharacterized protein.	Uncharacterized protein.	0.499
B9Z55_002226	Cni-let-2	A0A2G5VJQ0	A0A2G5SJT5	Uncharacterized protein.	Collagen IV NC1 domain-containing protein.	0.492
B9Z55_002226	Cni-mig-18	A0A2G5VJQ0	A0A2G5UKM2	Uncharacterized protein.	Uncharacterized protein.	0.420
B9Z55_002226	Cni-mig-6	A0A2G5VJQ0	A0A2G5T7B0	Uncharacterized protein.	Uncharacterized protein.	0.408
B9Z55_002226	Cni-nid-1	A0A2G5VJQ0	A0A2G5TIY9	Uncharacterized protein.	Uncharacterized protein.	0.810
B9Z55_010527	Cni-ZC250.2	A0A2G5UG80	A0A2G5TK55	Uncharacterized protein.	Uncharacterized protein.	0.547
B9Z55_010527	Cni-adt-2	A0A2G5UG80	A0A2G5SWF5	Uncharacterized protein.	Peptidase M12B domain-containing protein.	0.569
B9Z55_010527	Cni-madd-4	A0A2G5UG80	A0A2G5VJ84	Uncharacterized protein.	Ig-like domain-containing protein.	0.406
B9Z55_010527	Cni-mig-6	A0A2G5UG80	A0A2G5T7B0	Uncharacterized protein.	Uncharacterized protein.	0.421
B9Z55_013219	B9Z55_002226	A0A2G5U108	A0A2G5VJQ0	Fibulin-1; Belongs to the fibulin family.	Uncharacterized protein.	0.604
B9Z55_013219	Cni-T19D2.1	A0A2G5U108	A0A2G5SSM6	Fibulin-1; Belongs to the fibulin family.	Peptidase M12B domain-containing protein.	0.625
B9Z55_013219	Cni-ZC250.2	A0A2G5U108	A0A2G5TK55	Fibulin-1; Belongs to the fibulin family.	Uncharacterized protein.	0.547
B9Z55_013219	Cni-dgn-1	A0A2G5U108	A0A2G5SQ05	Fibulin-1; Belongs to the fibulin family.	Peptidase S72 domain-containing protein.	0.416

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