(92 nodes) Regulation of multicellular organism growth network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cni-unc-104	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1635 aa)
	Cni-dpy-2	Col_cuticle_N domain-containing protein. (380 aa)
	Cni-gld-3	KH_10 domain-containing protein. (956 aa)
	Cni-unc-53	Uncharacterized protein. (1568 aa)
	Cni-raga-1	Uncharacterized protein. (312 aa)
	Cni-sma-6	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (629 aa)
	Cni-phb-2	Prohibitin. (294 aa)
	Cni-sam-4	Uncharacterized protein. (257 aa)
	Cni-gcy-12	Guanylate cyclase. (1678 aa)
	Cni-rig-6	Uncharacterized protein. (962 aa)
	Cni-nol-1	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (714 aa)
	Cni-lin-35	Uncharacterized protein. (921 aa)
	Cni-iftb-1	eIF2B_5 domain-containing protein. (250 aa)
	Cni-lin-59	Uncharacterized protein. (1299 aa)
	Cni-dpy-5	Col_cuticle_N domain-containing protein. (284 aa)
	Cni-let-607	BZIP domain-containing protein. (748 aa)
	B9Z55_002655	Uncharacterized protein. (86 aa)
	B9Z55_002654	Fork-head domain-containing protein. (250 aa)
	Cni-rad-8	PKS_ER domain-containing protein. (366 aa)
	B9Z55_002939	ANK_REP_REGION domain-containing protein. (620 aa)
	B9Z55_002938	ANK_REP_REGION domain-containing protein. (1098 aa)
	Cni-che-2	Uncharacterized protein. (761 aa)
	Cni-tfg-1	PB1 domain-containing protein. (476 aa)
	B9Z55_000462	Uncharacterized protein. (243 aa)
	B9Z55_000461	Uncharacterized protein. (470 aa)
	Cni-phb-1	Prohibitin. (275 aa)
	Cni-drag-1	Uncharacterized protein. (414 aa)
	Cni-unc-40	Uncharacterized protein. (1408 aa)
	Cnig_chr_I.g91	Uncharacterized protein. (4732 aa)
	Cni-daf-2	Uncharacterized protein. (1954 aa)
	B9Z55_029164	Uncharacterized protein. (76 aa)
	B9Z55_027674	Uncharacterized protein. (98 aa)
	Cni-nac-2	Uncharacterized protein. (1059 aa)
	Cni-pde-2	Phosphodiesterase. (1046 aa)
	Cni-pha-2	Homeobox domain-containing protein. (228 aa)
	B9Z55_022548	Protein kinase domain-containing protein. (526 aa)
	B9Z55_022550	Protein kinase domain-containing protein. (533 aa)
	Cni-kin-29	Protein kinase domain-containing protein. (813 aa)
	Cni-tsp-21	Tetraspanin. (298 aa)
	Cni-hst-2	Uncharacterized protein. (325 aa)
	Cni-sma-9	Uncharacterized protein. (2419 aa)
	Cni-spc-1	Uncharacterized protein. (2427 aa)
	Cni-cnnm-3	Uncharacterized protein. (851 aa)
	Cni-lon-2	Uncharacterized protein. (509 aa)
	Cni-tsp-14	Tetraspanin. (450 aa)
	Cni-hst-6	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (303 aa)
	B9Z55_024281	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (83 aa)
	Cni-pept-1	Uncharacterized protein. (838 aa)
	Cni-unc-10	Uncharacterized protein. (2198 aa)
	Cni-adt-2	Peptidase M12B domain-containing protein. (1026 aa)
	Cni-obr-3	PH domain-containing protein. (779 aa)
	Cni-dpy-30	Uncharacterized protein. (140 aa)
	Cni-lon-3	Col_cuticle_N domain-containing protein. (324 aa)
	Cni-sma-1	Uncharacterized protein. (4259 aa)
	Cni-daf-11	Guanylate cyclase. (1110 aa)
	Cni-dpy-11	Thioredoxin domain-containing protein. (246 aa)
	Cni-dbl-1	TGF_BETA_2 domain-containing protein. (373 aa)
	B9Z55_021422	Uncharacterized protein. (496 aa)
	B9Z55_021737	Protein kinase domain-containing protein. (870 aa)
	B9Z55_021738	Protein kinase domain-containing protein. (767 aa)
	Cni-swsn-1	Uncharacterized protein. (800 aa)
	Cni-lon-8	Uncharacterized protein. (161 aa)
	Cni-cnnm-1	Uncharacterized protein. (815 aa)
	B9Z55_022142	Uncharacterized protein. (135 aa)
	Cni-nhr-38	Nuclear receptor domain-containing protein. (360 aa)
	Cni-bec-1	Uncharacterized protein. (375 aa)
	B9Z55_013464	Uncharacterized protein. (319 aa)
	B9Z55_013463	Uncharacterized protein. (1822 aa)
	B9Z55_013465	Uncharacterized protein. (5248 aa)
	Cni-tin-9.1	zf-Tim10_DDP domain-containing protein. (78 aa)
	Cni-let-653	Uncharacterized protein. (816 aa)
	Cni-tsp-12	Tetraspanin. (332 aa)
	Cni-unc-26	SAC domain-containing protein. (1114 aa)
	B9Z55_016123	Ig-like domain-containing protein. (192 aa)
	B9Z55_016124	Ig-like domain-containing protein. (129 aa)
	Cni-hse-5	C5-epim_C domain-containing protein. (612 aa)
	Cni-sma-3	Dwarfin sma. (392 aa)
	Cni-sma-2	MH2 domain-containing protein. (247 aa)
	B9Z55_010964	MH1 domain-containing protein. (218 aa)
	Cni-unc-64	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (293 aa)
	Cni-gro-1	C2H2-type domain-containing protein; Belongs to the IPP transferase family. (440 aa)
	Cni-dss-1	Uncharacterized protein. (77 aa)
	Cni-dpy-1	Uncharacterized protein. (1487 aa)
	Cni-sma-4	Dwarfin sma. (606 aa)
	Cni-daf-4	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (764 aa)
	Cni-lon-1	SCP domain-containing protein; Belongs to the CRISP family. (311 aa)
	Cni-umps-1	OMPdecase domain-containing protein. (498 aa)
	Cni-dpy-18	Fe2OG dioxygenase domain-containing protein. (559 aa)
	Cni-sbp-1	BHLH domain-containing protein. (1116 aa)
	Cni-tin-10	zf-Tim10_DDP domain-containing protein. (86 aa)
	Cni-eat-3	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (989 aa)
	Cni-nst-1	CP-type G domain-containing protein. (554 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_000461	Cni-unc-104	A0A2G5VT90	A0A2G5UZZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.764
B9Z55_000462	Cni-unc-104	A0A2G5VT89	A0A2G5UZZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.764
B9Z55_002654	B9Z55_010964	A0A2G5VLI7	A0A2G5UI75	Fork-head domain-containing protein.	MH1 domain-containing protein.	0.712
B9Z55_002654	B9Z55_021737	A0A2G5VLI7	A0A2G5TT94	Fork-head domain-containing protein.	Protein kinase domain-containing protein.	0.489
B9Z55_002654	Cni-bec-1	A0A2G5VLI7	A0A2G5U1L5	Fork-head domain-containing protein.	Uncharacterized protein.	0.584
B9Z55_002654	Cni-daf-11	A0A2G5VLI7	A0A2G5TGZ3	Fork-head domain-containing protein.	Guanylate cyclase.	0.539
B9Z55_002654	Cni-daf-2	A0A2G5VLI7	A0A2G5UNT9	Fork-head domain-containing protein.	Uncharacterized protein.	0.983
B9Z55_002654	Cni-daf-4	A0A2G5VLI7	A0A2G5US08	Fork-head domain-containing protein.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.696
B9Z55_002654	Cni-dbl-1	A0A2G5VLI7	A0A2G5TKG2	Fork-head domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.701
B9Z55_002654	Cni-kin-29	A0A2G5VLI7	A0A2G5SMV5	Fork-head domain-containing protein.	Protein kinase domain-containing protein.	0.611
B9Z55_002654	Cni-pept-1	A0A2G5VLI7	A0A2G5SUX1	Fork-head domain-containing protein.	Uncharacterized protein.	0.503
B9Z55_002654	Cni-raga-1	A0A2G5VLI7	A0A2G5V2K9	Fork-head domain-containing protein.	Uncharacterized protein.	0.406
B9Z55_002654	Cni-sbp-1	A0A2G5VLI7	A0A2G5UTZ0	Fork-head domain-containing protein.	BHLH domain-containing protein.	0.774
B9Z55_002654	Cni-sma-2	A0A2G5VLI7	A0A2G5UI21	Fork-head domain-containing protein.	MH2 domain-containing protein.	0.712
B9Z55_002654	Cni-sma-3	A0A2G5VLI7	A0A2G5UEZ8	Fork-head domain-containing protein.	Dwarfin sma.	0.712
B9Z55_002654	Cni-sma-4	A0A2G5VLI7	A0A2G5URK9	Fork-head domain-containing protein.	Dwarfin sma.	0.776
B9Z55_002654	Cni-sma-6	A0A2G5VLI7	A0A2G5V3U8	Fork-head domain-containing protein.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.502
B9Z55_002655	B9Z55_010964	A0A2G5VLG3	A0A2G5UI75	Uncharacterized protein.	MH1 domain-containing protein.	0.712
B9Z55_002655	B9Z55_021737	A0A2G5VLG3	A0A2G5TT94	Uncharacterized protein.	Protein kinase domain-containing protein.	0.489
B9Z55_002655	Cni-bec-1	A0A2G5VLG3	A0A2G5U1L5	Uncharacterized protein.	Uncharacterized protein.	0.584

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