(33 nodes) Sarcomere organization network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9Z55_008541	Uncharacterized protein. (367 aa)
	Cni-unc-94	Uncharacterized protein. (406 aa)
	Cni-stn-1	Uncharacterized protein. (440 aa)
	B9Z55_001764	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1938 aa)
	B9Z55_001949	Uncharacterized protein. (5615 aa)
	B9Z55_001947	Uncharacterized protein. (656 aa)
	Cni-chn-1	Uncharacterized protein. (266 aa)
	Cni-dys-1	Uncharacterized protein. (3412 aa)
	B9Z55_003533	Calponin-homology (CH) domain-containing protein. (188 aa)
	B9Z55_003807	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1963 aa)
	B9Z55_000706	Dystrobrevin. (585 aa)
	B9Z55_000912	ZZ-type domain-containing protein. (364 aa)
	B9Z55_000926	Uncharacterized protein. (159 aa)
	Cni-unc-27	Uncharacterized protein. (263 aa)
	B9Z55_025461	Uncharacterized protein. (426 aa)
	B9Z55_025065	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1945 aa)
	Cni-tnt-3	Uncharacterized protein. (1198 aa)
	B9Z55_024523	Uncharacterized protein. (405 aa)
	Cni-slo-1	Uncharacterized protein. (1120 aa)
	Cni-tnt-4	Uncharacterized protein. (349 aa)
	B9Z55_016531	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1995 aa)
	B9Z55_026286	PID domain-containing protein. (174 aa)
	Cni-dyc-1	Uncharacterized protein. (794 aa)
	B9Z55_023863	WD_REPEATS_REGION domain-containing protein. (611 aa)
	Cni-unc-45	TPR_REGION domain-containing protein. (977 aa)
	B9Z55_021019	WD_REPEATS_REGION domain-containing protein. (599 aa)
	B9Z55_018935	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1969 aa)
	B9Z55_012707	Uncharacterized protein. (482 aa)
	B9Z55_012708	SoHo domain-containing protein. (595 aa)
	B9Z55_012964	Uncharacterized protein. (399 aa)
	B9Z55_012965	Uncharacterized protein. (119 aa)
	Cni-hum-9	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1493 aa)
	Cni-myo-6	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (720 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_000706	B9Z55_003533	A0A2G5VV38	A0A2G5VRA3	Dystrobrevin.	Calponin-homology (CH) domain-containing protein.	0.714
B9Z55_000706	B9Z55_026286	A0A2G5VV38	A0A2G5T2M1	Dystrobrevin.	PID domain-containing protein.	0.509
B9Z55_000706	Cni-dyc-1	A0A2G5VV38	A0A2G5T238	Dystrobrevin.	Uncharacterized protein.	0.560
B9Z55_000706	Cni-dys-1	A0A2G5VV38	A0A2G5VQQ7	Dystrobrevin.	Uncharacterized protein.	0.864
B9Z55_000706	Cni-slo-1	A0A2G5VV38	A0A2G5TTG7	Dystrobrevin.	Uncharacterized protein.	0.560
B9Z55_000706	Cni-stn-1	A0A2G5VV38	A0A2G5VFZ9	Dystrobrevin.	Uncharacterized protein.	0.939
B9Z55_000706	Cni-unc-27	A0A2G5VV38	A0A2G5SYV9	Dystrobrevin.	Uncharacterized protein.	0.457
B9Z55_000912	B9Z55_003533	A0A2G5VVG2	A0A2G5VRA3	ZZ-type domain-containing protein.	Calponin-homology (CH) domain-containing protein.	0.714
B9Z55_000912	B9Z55_026286	A0A2G5VVG2	A0A2G5T2M1	ZZ-type domain-containing protein.	PID domain-containing protein.	0.509
B9Z55_000912	Cni-dyc-1	A0A2G5VVG2	A0A2G5T238	ZZ-type domain-containing protein.	Uncharacterized protein.	0.560
B9Z55_000912	Cni-dys-1	A0A2G5VVG2	A0A2G5VQQ7	ZZ-type domain-containing protein.	Uncharacterized protein.	0.864
B9Z55_000912	Cni-slo-1	A0A2G5VVG2	A0A2G5TTG7	ZZ-type domain-containing protein.	Uncharacterized protein.	0.560
B9Z55_000912	Cni-stn-1	A0A2G5VVG2	A0A2G5VFZ9	ZZ-type domain-containing protein.	Uncharacterized protein.	0.939
B9Z55_000912	Cni-unc-27	A0A2G5VVG2	A0A2G5SYV9	ZZ-type domain-containing protein.	Uncharacterized protein.	0.457
B9Z55_000926	B9Z55_003533	A0A2G5VVH7	A0A2G5VRA3	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.714
B9Z55_000926	B9Z55_026286	A0A2G5VVH7	A0A2G5T2M1	Uncharacterized protein.	PID domain-containing protein.	0.509
B9Z55_000926	Cni-dyc-1	A0A2G5VVH7	A0A2G5T238	Uncharacterized protein.	Uncharacterized protein.	0.560
B9Z55_000926	Cni-dys-1	A0A2G5VVH7	A0A2G5VQQ7	Uncharacterized protein.	Uncharacterized protein.	0.797
B9Z55_000926	Cni-slo-1	A0A2G5VVH7	A0A2G5TTG7	Uncharacterized protein.	Uncharacterized protein.	0.560
B9Z55_000926	Cni-stn-1	A0A2G5VVH7	A0A2G5VFZ9	Uncharacterized protein.	Uncharacterized protein.	0.909

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