STRINGSTRING
Cni-sec-24.1 Cni-sec-24.1 Cni-tfg-1 Cni-tfg-1 Cni-gbf-1 Cni-gbf-1 Cni-sec-16 Cni-sec-16 Cni-sar-1 Cni-sar-1 Cni-sec-24.2 Cni-sec-24.2 Cni-sec-31 Cni-sec-31 Cni-sec-23 Cni-sec-23 Cni-F13B9.1 Cni-F13B9.1 Cni-sft-4 Cni-sft-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cni-sec-24.1Uncharacterized protein. (1160 aa)
Cni-tfg-1PB1 domain-containing protein. (476 aa)
Cni-gbf-1SEC7 domain-containing protein. (1972 aa)
Cni-sec-16Protein transport protein sec16. (1236 aa)
Cni-sar-1Uncharacterized protein. (207 aa)
Cni-sec-24.2Uncharacterized protein. (976 aa)
Cni-sec-31WD_REPEATS_REGION domain-containing protein. (1093 aa)
Cni-sec-23Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (257 aa)
Cni-F13B9.1Protein transport protein sec16. (1610 aa)
Cni-sft-4Uncharacterized protein. (293 aa)
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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