(123 nodes) Secretory vesicle network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9Z55_020985	Uncharacterized protein. (303 aa)
	Cni-4R79.2	Uncharacterized protein. (403 aa)
	B9Z55_012091	Uncharacterized protein. (132 aa)
	Cni-Y116A8C.10	Uncharacterized protein. (203 aa)
	Cni-arl-8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	Cni-flh-3	FLYWCH-type domain-containing protein. (430 aa)
	B9Z55_009525	Uncharacterized protein. (1354 aa)
	B9Z55_009547	Uncharacterized protein. (78 aa)
	Cni-flh-1	Uncharacterized protein. (857 aa)
	Cni-drp-1	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (709 aa)
	Cni-itr-1	Uncharacterized protein. (2843 aa)
	B9Z55_013867	Uncharacterized protein. (84 aa)
	Cni-DH11.5	Uncharacterized protein. (531 aa)
	Cni-Y56A3A.33	Exonuclease domain-containing protein. (338 aa)
	Cni-vnut-1	MFS domain-containing protein. (456 aa)
	Cni-clh-3	Uncharacterized protein; Belongs to the chloride channel (TC 2.A.49) family. (1027 aa)
	Cni-snt-1	Uncharacterized protein. (443 aa)
	Cni-F54C9.11	Uncharacterized protein. (363 aa)
	B9Z55_010283	Uncharacterized protein. (114 aa)
	Cni-rbf-1	Uncharacterized protein. (1003 aa)
	Cni-unc-47	Aa_trans domain-containing protein. (484 aa)
	Cni-ttr-1	Uncharacterized protein. (110 aa)
	Cni-snt-2	C2 domain-containing protein. (231 aa)
	B9Z55_028162	Uncharacterized protein. (152 aa)
	Cni-cytb-5.2	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (151 aa)
	B9Z55_027441	Uncharacterized protein. (205 aa)
	B9Z55_022903	Uncharacterized protein. (163 aa)
	Cni-F54G2.1	Uncharacterized protein. (1201 aa)
	B9Z55_022900	Uncharacterized protein. (371 aa)
	Cni-K02E10.1	Uncharacterized protein. (223 aa)
	Cni-F29G6.1	Uncharacterized protein. (1176 aa)
	Cni-ZK813.6	Uncharacterized protein. (198 aa)
	Cni-rab-37	Uncharacterized protein. (183 aa)
	Cni-dop-3	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (609 aa)
	B9Z55_024633	Peptidase_M13 domain-containing protein. (497 aa)
	B9Z55_024639	Peptidase_M13 domain-containing protein. (510 aa)
	B9Z55_024640	Peptidase_M13 domain-containing protein. (491 aa)
	Cni-unc-18	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (590 aa)
	B9Z55_025463	Peptidase_M13 domain-containing protein. (180 aa)
	B9Z55_025464	Uncharacterized protein. (424 aa)
	Cni-snt-7	C2 domain-containing protein. (455 aa)
	Cni-tbh-1	Uncharacterized protein. (516 aa)
	Cni-F20D1.1	Uncharacterized protein. (166 aa)
	Cni-F40E10.6	Uncharacterized protein. (398 aa)
	B9Z55_016942	Cytochrome b561 domain-containing protein. (256 aa)
	Cni-rps-30	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (130 aa)
	Cni-snt-3	Uncharacterized protein. (291 aa)
	B9Z55_018313	Uncharacterized protein. (541 aa)
	Cni-Y75B7AL.2	Uncharacterized protein. (166 aa)
	Cni-snt-5	Uncharacterized protein. (360 aa)
	B9Z55_018932	GTP_EFTU_D2 domain-containing protein. (284 aa)
	Cni-D2023.3	C2 domain-containing protein. (181 aa)
	B9Z55_018931	Tr-type G domain-containing protein. (269 aa)
	B9Z55_019107	Uncharacterized protein. (69 aa)
	Cni-grl-3	Ground-like domain-containing protein. (284 aa)
	Cni-spe-39	Uncharacterized protein. (523 aa)
	B9Z55_020077	TIL domain-containing protein. (93 aa)
	Cni-try-5	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (328 aa)
	B9Z55_020078	Uncharacterized protein. (137 aa)
	Cni-unc-41	Uncharacterized protein. (1654 aa)
	B9Z55_020979	Uncharacterized protein. (502 aa)
	B9Z55_020982	Uncharacterized protein. (792 aa)
	B9Z55_020984	Uncharacterized protein. (641 aa)
	B9Z55_020990	Uncharacterized protein. (683 aa)
	B9Z55_020986	Uncharacterized protein. (696 aa)
	B9Z55_020983	Uncharacterized protein. (859 aa)
	B9Z55_020988	Uncharacterized protein. (587 aa)
	B9Z55_020980	Uncharacterized protein. (697 aa)
	B9Z55_020981	Uncharacterized protein. (628 aa)
	Cni-sbt-1	Uncharacterized protein. (211 aa)
	B9Z55_000819	LLGL domain-containing protein. (484 aa)
	B9Z55_000817	Lgl_C domain-containing protein. (838 aa)
	Cni-spe-38	Uncharacterized protein. (183 aa)
	Cni-Y48G8AR.2	FYVE-type domain-containing protein. (483 aa)
	B9Z55_002549	Exonuclease domain-containing protein. (304 aa)
	Cni-sulp-1	STAS domain-containing protein. (725 aa)
	Cni-rab-10	Uncharacterized protein. (201 aa)
	B9Z55_002473	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (341 aa)
	Cni-snt-4	Uncharacterized protein. (381 aa)
	Cni-T08G11.1	Uncharacterized protein. (3213 aa)
	Cni-aex-1	C2 domain-containing protein. (965 aa)
	Cni-sue-1	Uncharacterized protein. (539 aa)
	Cni-nhr-23	Uncharacterized protein. (597 aa)
	B9Z55_007969	C2 domain-containing protein. (982 aa)
	B9Z55_007970	C2 domain-containing protein. (160 aa)
	B9Z55_007211	Uncharacterized protein. (553 aa)
	B9Z55_007195	Uncharacterized protein. (666 aa)
	B9Z55_007189	Uncharacterized protein. (704 aa)
	B9Z55_007214	Uncharacterized protein. (703 aa)
	B9Z55_007218	Uncharacterized protein. (736 aa)
	B9Z55_010687	Uncharacterized protein. (148 aa)
	Cni-F55H2.5	Cytochrome b561 domain-containing protein. (266 aa)
	B9Z55_010688	Uncharacterized protein. (149 aa)
	B9Z55_010917	MFS domain-containing protein. (264 aa)
	Cni-ugtp-1	Uncharacterized protein. (357 aa)
	B9Z55_010919	Uncharacterized protein. (383 aa)
	Cni-R13A5.9	MFS_1_like domain-containing protein. (687 aa)
	Cni-ida-1	Uncharacterized protein. (774 aa)
	B9Z55_009546	MFS domain-containing protein. (516 aa)
	B9Z55_007215	Uncharacterized protein. (736 aa)
	B9Z55_007193	Uncharacterized protein. (786 aa)
	B9Z55_007212	Uncharacterized protein. (562 aa)
	B9Z55_007216	Uncharacterized protein. (113 aa)
	B9Z55_007213	Uncharacterized protein. (345 aa)
	B9Z55_007217	Uncharacterized protein. (590 aa)
	B9Z55_007194	Uncharacterized protein. (763 aa)
	Cni-nep-18	Uncharacterized protein. (691 aa)
	Cni-nep-5	Uncharacterized protein. (687 aa)
	B9Z55_006351	Exonuclease domain-containing protein. (308 aa)
	B9Z55_006261	Peptidase_M13 domain-containing protein. (750 aa)
	B9Z55_006288	Uncharacterized protein. (75 aa)
	Cni-rab-3	Uncharacterized protein. (219 aa)
	B9Z55_005484	Uncharacterized protein. (122 aa)
	Cni-unc-31	Uncharacterized protein. (1311 aa)
	Cni-cho-1	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (576 aa)
	Cni-unc-26	SAC domain-containing protein. (1114 aa)
	Cni-sph-1	MARVEL domain-containing protein. (231 aa)
	Cni-R09H10.5	Uncharacterized protein. (1631 aa)
	Cni-Y69A2AL.2	Phospholipase A(2). (165 aa)
	Cni-snn-1	ATP-grasp domain-containing protein. (485 aa)
	Cni-T07A9.10	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (560 aa)
	B9Z55_029143	Peptidase_M13 domain-containing protein. (240 aa)
	Cni-T04H1.2	Tr-type G domain-containing protein. (586 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9Z55_000817	B9Z55_000819	A0A2G5VVC8	A0A2G5VVD0	Lgl_C domain-containing protein.	LLGL domain-containing protein.	0.900
B9Z55_000817	Cni-4R79.2	A0A2G5VVC8	A0A2G5TV63	Lgl_C domain-containing protein.	Uncharacterized protein.	0.414
B9Z55_000817	Cni-K02E10.1	A0A2G5VVC8	A0A2G5SN53	Lgl_C domain-containing protein.	Uncharacterized protein.	0.414
B9Z55_000817	Cni-T07A9.10	A0A2G5VVC8	A0A2G5UDW0	Lgl_C domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.482
B9Z55_000817	Cni-rab-10	A0A2G5VVC8	A0A2G5VKU1	Lgl_C domain-containing protein.	Uncharacterized protein.	0.593
B9Z55_000817	Cni-snt-4	A0A2G5VVC8	A0A2G5VKJ9	Lgl_C domain-containing protein.	Uncharacterized protein.	0.482
B9Z55_000817	Cni-unc-18	A0A2G5VVC8	A0A2G5SWD6	Lgl_C domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.581
B9Z55_000817	Cni-unc-31	A0A2G5VVC8	A0A2G5U5S9	Lgl_C domain-containing protein.	Uncharacterized protein.	0.454
B9Z55_000819	B9Z55_000817	A0A2G5VVD0	A0A2G5VVC8	LLGL domain-containing protein.	Lgl_C domain-containing protein.	0.900
B9Z55_000819	Cni-4R79.2	A0A2G5VVD0	A0A2G5TV63	LLGL domain-containing protein.	Uncharacterized protein.	0.414
B9Z55_000819	Cni-K02E10.1	A0A2G5VVD0	A0A2G5SN53	LLGL domain-containing protein.	Uncharacterized protein.	0.414
B9Z55_000819	Cni-T07A9.10	A0A2G5VVD0	A0A2G5UDW0	LLGL domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.482
B9Z55_000819	Cni-rab-10	A0A2G5VVD0	A0A2G5VKU1	LLGL domain-containing protein.	Uncharacterized protein.	0.593
B9Z55_000819	Cni-snt-4	A0A2G5VVD0	A0A2G5VKJ9	LLGL domain-containing protein.	Uncharacterized protein.	0.482
B9Z55_000819	Cni-unc-18	A0A2G5VVD0	A0A2G5SWD6	LLGL domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.581
B9Z55_000819	Cni-unc-31	A0A2G5VVD0	A0A2G5U5S9	LLGL domain-containing protein.	Uncharacterized protein.	0.454
B9Z55_002473	Cni-F29G6.1	A0A2G5VKL8	A0A2G5SNB1	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.646
B9Z55_002473	Cni-ZK813.6	A0A2G5VKL8	A0A2G5SSC1	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.646
B9Z55_002473	Cni-rps-30	A0A2G5VKL8	A0A2G5T7Z4	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.463
B9Z55_002549	Cni-Y56A3A.33	A0A2G5VL69	A0A2G5UU81	Exonuclease domain-containing protein.	Exonuclease domain-containing protein.	0.772

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