(7 nodes) Syntaxin/epimorphin, conserved site network (Caenorhabditis nigoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cni-syx-6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (122 aa)
	Cni-syx-3	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (305 aa)
	Cni-syx-2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (309 aa)
	Cni-unc-64	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (293 aa)
	Cni-syx-4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (293 aa)
	Cni-syx-7	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (244 aa)
	Cni-syx-5	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (412 aa)

Your Current Organism:

Caenorhabditis nigoni

NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cni-syx-2	Cni-syx-3	A0A2G5T2I2	A0A2G5STM2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.766
Cni-syx-2	Cni-syx-4	A0A2G5T2I2	A0A2G5VSV8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.928
Cni-syx-2	Cni-syx-5	A0A2G5T2I2	A0A2G5THK6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.900
Cni-syx-2	Cni-syx-6	A0A2G5T2I2	A0A2G5SS00	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.765
Cni-syx-2	Cni-syx-7	A0A2G5T2I2	A0A2G5VJD4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.865
Cni-syx-2	Cni-unc-64	A0A2G5T2I2	A0A2G5UJC8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.924
Cni-syx-3	Cni-syx-2	A0A2G5STM2	A0A2G5T2I2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.766
Cni-syx-3	Cni-syx-5	A0A2G5STM2	A0A2G5THK6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.818
Cni-syx-3	Cni-syx-6	A0A2G5STM2	A0A2G5SS00	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.719
Cni-syx-3	Cni-syx-7	A0A2G5STM2	A0A2G5VJD4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.744
Cni-syx-3	Cni-unc-64	A0A2G5STM2	A0A2G5UJC8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.590
Cni-syx-4	Cni-syx-2	A0A2G5VSV8	A0A2G5T2I2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.928
Cni-syx-4	Cni-syx-5	A0A2G5VSV8	A0A2G5THK6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.818
Cni-syx-4	Cni-syx-6	A0A2G5VSV8	A0A2G5SS00	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.719
Cni-syx-4	Cni-syx-7	A0A2G5VSV8	A0A2G5VJD4	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.744
Cni-syx-4	Cni-unc-64	A0A2G5VSV8	A0A2G5UJC8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.923
Cni-syx-5	Cni-syx-2	A0A2G5THK6	A0A2G5T2I2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.900
Cni-syx-5	Cni-syx-3	A0A2G5THK6	A0A2G5STM2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.818
Cni-syx-5	Cni-syx-4	A0A2G5THK6	A0A2G5VSV8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.818
Cni-syx-5	Cni-syx-6	A0A2G5THK6	A0A2G5SS00	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.992

page 1 of 2

Server load: low (12%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About