(108 nodes) Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000000084	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (184 aa)
	ENSAPEP00000000899	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (156 aa)
	WDR31	WD repeat domain 31. (355 aa)
	ENSAPEP00000002709	Ribosomal protein L14. (206 aa)
	ENSAPEP00000003986	Ribosomal protein L8. (257 aa)
	ENSAPEP00000004093	SERPINE1 mRNA binding protein 1b. (442 aa)
	RPS17	Ribosomal protein S17. (134 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	ENSAPEP00000004515	Uncharacterized protein. (136 aa)
	ENSAPEP00000004901	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	ENSAPEP00000004920	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
	ENSAPEP00000005485	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (180 aa)
	ENSAPEP00000005678	40S ribosomal protein S27. (84 aa)
	ENSAPEP00000005735	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (140 aa)
	ENSAPEP00000005804	Ribosomal protein L22-like 1. (143 aa)
	ENSAPEP00000005883	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	ENSAPEP00000006241	Ribosomal protein L7-like 1. (247 aa)
	RPL36A	Ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	ENSAPEP00000006943	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	ENSAPEP00000007292	IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
	ENSAPEP00000007653	Ribosomal protein L39. (52 aa)
	ENSAPEP00000007918	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (456 aa)
	ENSAPEP00000007950	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	ENSAPEP00000008212	Uncharacterized protein. (130 aa)
	ENSAPEP00000008980	ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
	ENSAPEP00000009489	Ribosomal protein S19. (193 aa)
	ENSAPEP00000009511	Ribosomal protein L18. (193 aa)
	RPS19	Ribosomal protein S19. (152 aa)
	ENSAPEP00000010004	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	ENSAPEP00000010438	Tr-type G domain-containing protein. (858 aa)
	ENSAPEP00000010772	Ribosomal protein L24. (157 aa)
	ENSAPEP00000010776	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	RPS20	Ribosomal protein S20. (119 aa)
	ENSAPEP00000011086	Eukaryotic translation elongation factor 1 beta 2; Belongs to the EF-1-beta/EF-1-delta family. (215 aa)
	ENSAPEP00000011499	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	ENSAPEP00000012581	40S ribosomal protein S27. (93 aa)
	ENSAPEP00000012789	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (154 aa)
	ENSAPEP00000013494	SERPINE1 mRNA binding protein 1a. (392 aa)
	ENSAPEP00000014003	Ribosomal protein L32. (135 aa)
	ENSAPEP00000014098	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (187 aa)
	ENSAPEP00000014448	Ribosomal protein S27a. (156 aa)
	ENSAPEP00000014489	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (428 aa)
	ENSAPEP00000015171	Uncharacterized protein. (609 aa)
	ENSAPEP00000015195	Uncharacterized protein. (131 aa)
	ENSAPEP00000015346	Ribosomal protein L30. (116 aa)
	ENSAPEP00000015430	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ENSAPEP00000015729	Eukaryotic translation elongation factor 1 gamma. (437 aa)
	ENSAPEP00000015847	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	ENSAPEP00000016055	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
	ENSAPEP00000016069	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (212 aa)
	ENSAPEP00000016170	eIF-5a domain-containing protein. (187 aa)
	ENSAPEP00000016484	Ribosomal protein L26. (221 aa)
	RSRC1	Arginine and serine rich coiled-coil 1. (324 aa)
	ENSAPEP00000017445	Tumor protein, translationally-controlled 1; Belongs to the TCTP family. (195 aa)
	ENSAPEP00000017848	NAD(P)-bd_dom domain-containing protein. (219 aa)
	EEF2	Eukaryotic translation elongation factor 2. (858 aa)
	ENSAPEP00000019698	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	RPL5	Ribosomal protein L5. (298 aa)
	ENSAPEP00000020743	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
	ENSAPEP00000022205	Ribosomal protein S28. (69 aa)
	ENSAPEP00000022814	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (301 aa)
	ENSAPEP00000022900	Dedicator of cytokinesis 4b; Belongs to the DOCK family. (1784 aa)
	ENSAPEP00000023013	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (189 aa)
	ENSAPEP00000023324	CD74 molecule, major histocompatibility complex, class II invariant chain a. (280 aa)
	ENSAPEP00000023449	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	ENSAPEP00000024026	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	ENSAPEP00000024358	Ribosomal protein L6. (258 aa)
	ENSAPEP00000024403	Receptor for activated C kinase 1. (317 aa)
	ENSAPEP00000025201	Ribosomal protein L10. (215 aa)
	ENSAPEP00000026417	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	ENSAPEP00000026434	Ribosomal protein L35a. (111 aa)
	ENSAPEP00000026538	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	ENSAPEP00000026843	Uncharacterized protein. (121 aa)
	ENSAPEP00000027129	Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	ENSAPEP00000027312	FA complementation group E. (510 aa)
	ENSAPEP00000027341	Ribosomal protein L9. (193 aa)
	ENSAPEP00000027345	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (246 aa)
	ENSAPEP00000027397	40S ribosomal protein S27. (93 aa)
	ENSAPEP00000028087	Ribosomal protein L21. (160 aa)
	ENSAPEP00000028762	Ribosomal protein L22. (130 aa)
	ENSAPEP00000028854	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (408 aa)
	ENSAPEP00000029130	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	ENSAPEP00000029150	Interferon-induced protein 35. (374 aa)
	ENSAPEP00000029234	Ribosomal protein L4. (374 aa)
	ENSAPEP00000029386	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	ENSAPEP00000029499	Ribosomal protein L28. (137 aa)
	ENSAPEP00000029847	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (129 aa)
	ENSAPEP00000029857	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	RPL7	Ribosomal protein L7. (245 aa)
	RPL37A	Ribosomal protein L37a. (149 aa)
	ENSAPEP00000030922	Coiled-coil domain containing 105. (444 aa)
	ENSAPEP00000031142	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (150 aa)
	ENSAPEP00000031395	Ribosomal protein L34. (127 aa)
	RPL7A	Ribosomal protein L7a. (271 aa)
	ENSAPEP00000032116	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
	ENSAPEP00000032535	Ribosomal protein S10. (166 aa)
	ENSAPEP00000032697	Uncharacterized protein. (88 aa)
	RPS29	Ribosomal protein S29. (134 aa)
	ENSAPEP00000033000	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	RPL5-2	Ribosomal protein L5b. (298 aa)
	ENSAPEP00000033634	Ribosomal protein, large P2. (115 aa)
	ENSAPEP00000033796	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (237 aa)
	ENSAPEP00000034767	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	ENSAPEP00000034817	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEF2	ENSAPEP00000000084	ENSAPEP00000017955	ENSAPEP00000000084	Eukaryotic translation elongation factor 2.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.991
EEF2	ENSAPEP00000000899	ENSAPEP00000017955	ENSAPEP00000000899	Eukaryotic translation elongation factor 2.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.990
EEF2	ENSAPEP00000002709	ENSAPEP00000017955	ENSAPEP00000002709	Eukaryotic translation elongation factor 2.	Ribosomal protein L14.	0.987
EEF2	ENSAPEP00000003986	ENSAPEP00000017955	ENSAPEP00000003986	Eukaryotic translation elongation factor 2.	Ribosomal protein L8.	0.995
EEF2	ENSAPEP00000004093	ENSAPEP00000017955	ENSAPEP00000004093	Eukaryotic translation elongation factor 2.	SERPINE1 mRNA binding protein 1b.	0.886
EEF2	ENSAPEP00000004515	ENSAPEP00000017955	ENSAPEP00000004515	Eukaryotic translation elongation factor 2.	Uncharacterized protein.	0.877
EEF2	ENSAPEP00000004901	ENSAPEP00000017955	ENSAPEP00000004901	Eukaryotic translation elongation factor 2.	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.911
EEF2	ENSAPEP00000004920	ENSAPEP00000017955	ENSAPEP00000004920	Eukaryotic translation elongation factor 2.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.995
EEF2	ENSAPEP00000005485	ENSAPEP00000017955	ENSAPEP00000005485	Eukaryotic translation elongation factor 2.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.993
EEF2	ENSAPEP00000005678	ENSAPEP00000017955	ENSAPEP00000005678	Eukaryotic translation elongation factor 2.	40S ribosomal protein S27.	0.908
EEF2	ENSAPEP00000005735	ENSAPEP00000017955	ENSAPEP00000005735	Eukaryotic translation elongation factor 2.	Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.983
EEF2	ENSAPEP00000005804	ENSAPEP00000017955	ENSAPEP00000005804	Eukaryotic translation elongation factor 2.	Ribosomal protein L22-like 1.	0.891
EEF2	ENSAPEP00000005883	ENSAPEP00000017955	ENSAPEP00000005883	Eukaryotic translation elongation factor 2.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.971
EEF2	ENSAPEP00000006241	ENSAPEP00000017955	ENSAPEP00000006241	Eukaryotic translation elongation factor 2.	Ribosomal protein L7-like 1.	0.975
EEF2	ENSAPEP00000006943	ENSAPEP00000017955	ENSAPEP00000006943	Eukaryotic translation elongation factor 2.	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.985
EEF2	ENSAPEP00000007292	ENSAPEP00000017955	ENSAPEP00000007292	Eukaryotic translation elongation factor 2.	IMP U3 small nucleolar ribonucleoprotein 3.	0.970
EEF2	ENSAPEP00000007653	ENSAPEP00000017955	ENSAPEP00000007653	Eukaryotic translation elongation factor 2.	Ribosomal protein L39.	0.953
EEF2	ENSAPEP00000007918	ENSAPEP00000017955	ENSAPEP00000007918	Eukaryotic translation elongation factor 2.	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.983
EEF2	ENSAPEP00000007950	ENSAPEP00000017955	ENSAPEP00000007950	Eukaryotic translation elongation factor 2.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.964
EEF2	ENSAPEP00000008212	ENSAPEP00000017955	ENSAPEP00000008212	Eukaryotic translation elongation factor 2.	Uncharacterized protein.	0.891