(5 nodes) Organellar small ribosomal subunit network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000000687	Mitochondrial ribosomal protein S22. (341 aa)
	ENSAPEP00000003618	Mitochondrial ribosomal protein S31. (381 aa)
	ENSAPEP00000007694	Mitochondrial ribosomal protein S26. (207 aa)
	ENSAPEP00000011018	Mitochondrial ribosomal protein S23. (176 aa)
	ENSAPEP00000022530	Mitochondrial ribosomal protein S28. (172 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000000687	ENSAPEP00000003618	Mitochondrial ribosomal protein S22.	Mitochondrial ribosomal protein S31.	0.999
ENSAPEP00000000687	ENSAPEP00000007694	Mitochondrial ribosomal protein S22.	Mitochondrial ribosomal protein S26.	0.999
ENSAPEP00000000687	ENSAPEP00000011018	Mitochondrial ribosomal protein S22.	Mitochondrial ribosomal protein S23.	0.998
ENSAPEP00000000687	ENSAPEP00000022530	Mitochondrial ribosomal protein S22.	Mitochondrial ribosomal protein S28.	0.999
ENSAPEP00000003618	ENSAPEP00000000687	Mitochondrial ribosomal protein S31.	Mitochondrial ribosomal protein S22.	0.999
ENSAPEP00000003618	ENSAPEP00000007694	Mitochondrial ribosomal protein S31.	Mitochondrial ribosomal protein S26.	0.999
ENSAPEP00000003618	ENSAPEP00000011018	Mitochondrial ribosomal protein S31.	Mitochondrial ribosomal protein S23.	0.999
ENSAPEP00000003618	ENSAPEP00000022530	Mitochondrial ribosomal protein S31.	Mitochondrial ribosomal protein S28.	0.998
ENSAPEP00000007694	ENSAPEP00000000687	Mitochondrial ribosomal protein S26.	Mitochondrial ribosomal protein S22.	0.999
ENSAPEP00000007694	ENSAPEP00000003618	Mitochondrial ribosomal protein S26.	Mitochondrial ribosomal protein S31.	0.999
ENSAPEP00000007694	ENSAPEP00000011018	Mitochondrial ribosomal protein S26.	Mitochondrial ribosomal protein S23.	0.998
ENSAPEP00000007694	ENSAPEP00000022530	Mitochondrial ribosomal protein S26.	Mitochondrial ribosomal protein S28.	0.999
ENSAPEP00000011018	ENSAPEP00000000687	Mitochondrial ribosomal protein S23.	Mitochondrial ribosomal protein S22.	0.998
ENSAPEP00000011018	ENSAPEP00000003618	Mitochondrial ribosomal protein S23.	Mitochondrial ribosomal protein S31.	0.999
ENSAPEP00000011018	ENSAPEP00000007694	Mitochondrial ribosomal protein S23.	Mitochondrial ribosomal protein S26.	0.998
ENSAPEP00000011018	ENSAPEP00000022530	Mitochondrial ribosomal protein S23.	Mitochondrial ribosomal protein S28.	0.998
ENSAPEP00000022530	ENSAPEP00000000687	Mitochondrial ribosomal protein S28.	Mitochondrial ribosomal protein S22.	0.999
ENSAPEP00000022530	ENSAPEP00000003618	Mitochondrial ribosomal protein S28.	Mitochondrial ribosomal protein S31.	0.998
ENSAPEP00000022530	ENSAPEP00000007694	Mitochondrial ribosomal protein S28.	Mitochondrial ribosomal protein S26.	0.999
ENSAPEP00000022530	ENSAPEP00000011018	Mitochondrial ribosomal protein S28.	Mitochondrial ribosomal protein S23.	0.998