5 items (Amphiprion percula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000008640	Fas apoptotic inhibitory molecule a. (180 aa)
	ENSAPEP00000014145	Speriolin_C domain-containing protein. (247 aa)
	ENSAPEP00000024141	annotation not available (479 aa)
	ENSAPEP00000030197	Uncharacterized protein. (118 aa)
	ENSAPEP00000032373	Spermatogenesis associated 6. (470 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000008640	ENSAPEP00000032373	Fas apoptotic inhibitory molecule a.	Spermatogenesis associated 6.	0.506
ENSAPEP00000014145	ENSAPEP00000030197	Speriolin_C domain-containing protein.	Uncharacterized protein.	0.434
ENSAPEP00000014145	ENSAPEP00000032373	Speriolin_C domain-containing protein.	Spermatogenesis associated 6.	0.512
ENSAPEP00000024141	ENSAPEP00000030197	annotation not available	Uncharacterized protein.	0.408
ENSAPEP00000030197	ENSAPEP00000014145	Uncharacterized protein.	Speriolin_C domain-containing protein.	0.434
ENSAPEP00000030197	ENSAPEP00000024141	Uncharacterized protein.	annotation not available	0.408
ENSAPEP00000032373	ENSAPEP00000008640	Spermatogenesis associated 6.	Fas apoptotic inhibitory molecule a.	0.506
ENSAPEP00000032373	ENSAPEP00000014145	Spermatogenesis associated 6.	Speriolin_C domain-containing protein.	0.512