(4 nodes) Outer dynein arm network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000025786	Uncharacterized protein. (126 aa)
	ENSAPEP00000025924	Dynein, axonemal, intermediate chain 2b. (595 aa)
	ENSAPEP00000004439	Dynein, axonemal, intermediate chain 1, paralog 2. (617 aa)
	ENSAPEP00000012220	Dynein_attach_N domain-containing protein. (105 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000004439	ENSAPEP00000012220	Dynein, axonemal, intermediate chain 1, paralog 2.	Dynein_attach_N domain-containing protein.	0.543
ENSAPEP00000004439	ENSAPEP00000025786	Dynein, axonemal, intermediate chain 1, paralog 2.	Uncharacterized protein.	0.605
ENSAPEP00000004439	ENSAPEP00000025924	Dynein, axonemal, intermediate chain 1, paralog 2.	Dynein, axonemal, intermediate chain 2b.	0.519
ENSAPEP00000012220	ENSAPEP00000004439	Dynein_attach_N domain-containing protein.	Dynein, axonemal, intermediate chain 1, paralog 2.	0.543
ENSAPEP00000012220	ENSAPEP00000025786	Dynein_attach_N domain-containing protein.	Uncharacterized protein.	0.476
ENSAPEP00000012220	ENSAPEP00000025924	Dynein_attach_N domain-containing protein.	Dynein, axonemal, intermediate chain 2b.	0.476
ENSAPEP00000025786	ENSAPEP00000004439	Uncharacterized protein.	Dynein, axonemal, intermediate chain 1, paralog 2.	0.605
ENSAPEP00000025786	ENSAPEP00000012220	Uncharacterized protein.	Dynein_attach_N domain-containing protein.	0.476
ENSAPEP00000025924	ENSAPEP00000004439	Dynein, axonemal, intermediate chain 2b.	Dynein, axonemal, intermediate chain 1, paralog 2.	0.519
ENSAPEP00000025924	ENSAPEP00000012220	Dynein, axonemal, intermediate chain 2b.	Dynein_attach_N domain-containing protein.	0.476