8 items (Amphiprion percula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000022889	Nuclear receptor coactivator 4. (566 aa)
	ENSAPEP00000031688	Lysosomal associated membrane protein 1a. (415 aa)
	ENSAPEP00000020502	Leucine-rich repeat kinase 2. (2406 aa)
	ENSAPEP00000009512	Pleckstrin homology domain containing, family M (with RUN domain) member 1. (1251 aa)
	ENSAPEP00000007432	Sequestosome 1. (295 aa)
	ENSAPEP00000007389	PB1 domain-containing protein. (113 aa)
	ENSAPEP00000005801	Phosphatidylinositol 3-kinase catalytic subunit type 3. (875 aa)
	ENSAPEP00000029997	Battenin. (435 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000005801	ENSAPEP00000009512	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Pleckstrin homology domain containing, family M (with RUN domain) member 1.	0.760
ENSAPEP00000007389	ENSAPEP00000007432	PB1 domain-containing protein.	Sequestosome 1.	0.588
ENSAPEP00000007389	ENSAPEP00000031688	PB1 domain-containing protein.	Lysosomal associated membrane protein 1a.	0.434
ENSAPEP00000007432	ENSAPEP00000007389	Sequestosome 1.	PB1 domain-containing protein.	0.588
ENSAPEP00000007432	ENSAPEP00000031688	Sequestosome 1.	Lysosomal associated membrane protein 1a.	0.434
ENSAPEP00000009512	ENSAPEP00000005801	Pleckstrin homology domain containing, family M (with RUN domain) member 1.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.760
ENSAPEP00000031688	ENSAPEP00000007389	Lysosomal associated membrane protein 1a.	PB1 domain-containing protein.	0.434
ENSAPEP00000031688	ENSAPEP00000007432	Lysosomal associated membrane protein 1a.	Sequestosome 1.	0.434