(43 nodes) Chemorepellent activity network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000017664	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (788 aa)
	ENSAPEP00000018121	Semaphorin 4e; Belongs to the semaphorin family. (780 aa)
	ENSAPEP00000018418	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (750 aa)
	ENSAPEP00000018735	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (742 aa)
	ENSAPEP00000018908	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (747 aa)
	ENSAPEP00000019028	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (808 aa)
	ENSAPEP00000021804	Fibronectin leucine rich transmembrane protein 2. (621 aa)
	ENSAPEP00000021883	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H; Belongs to the semaphorin family. (748 aa)
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (910 aa)
	ENSAPEP00000025003	Sema domain-containing protein; Belongs to the semaphorin family. (803 aa)
	ENSAPEP00000026018	Sema domain-containing protein. (1011 aa)
	ENSAPEP00000026880	Centrosomal protein 85. (797 aa)
	SEMA6A	Semaphorin 6A; Belongs to the semaphorin family. (961 aa)
	ENSAPEP00000028170	Semaphorin 7A; Belongs to the semaphorin family. (651 aa)
	SEMA4F	Ssemaphorin 4F; Belongs to the semaphorin family. (849 aa)
	ENSAPEP00000028983	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (737 aa)
	ENSAPEP00000029484	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga; Belongs to the semaphorin family. (747 aa)
	ENSAPEP00000029796	Uncharacterized protein; Belongs to the semaphorin family. (789 aa)
	ENSAPEP00000017645	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (715 aa)
	ENSAPEP00000031928	Sema domain-containing protein. (1031 aa)
	ENSAPEP00000032039	Fibronectin leucine rich transmembrane protein 2. (673 aa)
	ENSAPEP00000032243	Si:dkey-49n23.1; Belongs to the semaphorin family. (706 aa)
	ENSAPEP00000032326	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (699 aa)
	ENSAPEP00000032601	Fibronectin leucine rich transmembrane 3. (650 aa)
	ENSAPEP00000034094	Uncharacterized protein. (235 aa)
	ENSAPEP00000034972	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1023 aa)
	ENSAPEP00000016738	EGF-like domain-containing protein. (90 aa)
	ENSAPEP00000016680	Uncharacterized protein; Belongs to the semaphorin family. (683 aa)
	ENSAPEP00000016151	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (682 aa)
	ENSAPEP00000016027	Sema domain-containing protein; Belongs to the semaphorin family. (1120 aa)
	ENSAPEP00000013849	Centrosomal protein 85, like. (750 aa)
	ENSAPEP00000013030	Si:ch211-129c21.1; Belongs to the semaphorin family. (805 aa)
	ENSAPEP00000011842	Sema domain-containing protein; Belongs to the semaphorin family. (748 aa)
	ENSAPEP00000010809	Uncharacterized protein; Belongs to the semaphorin family. (635 aa)
	ENSAPEP00000009340	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (864 aa)
	ENSAPEP00000007917	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (778 aa)
	ENSAPEP00000006040	Uncharacterized protein; Belongs to the semaphorin family. (868 aa)
	ENSAPEP00000003712	Uncharacterized protein; Belongs to the semaphorin family. (884 aa)
	ENSAPEP00000002767	Si:ch211-113g11.6; Belongs to the semaphorin family. (599 aa)
	ENSAPEP00000002344	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1075 aa)
	ENSAPEP00000001267	Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
	ENSAPEP00000000629	Sema domain-containing protein. (1068 aa)
	ENSAPEP00000017935	Uncharacterized protein; Belongs to the semaphorin family. (913 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPEP00000001267	ENSAPEP00000002344	ENSAPEP00000001267	ENSAPEP00000002344	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	0.488
ENSAPEP00000001267	ENSAPEP00000007917	ENSAPEP00000001267	ENSAPEP00000007917	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family.	0.488
ENSAPEP00000001267	ENSAPEP00000016027	ENSAPEP00000001267	ENSAPEP00000016027	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.488
ENSAPEP00000001267	ENSAPEP00000018418	ENSAPEP00000001267	ENSAPEP00000018418	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family.	0.488
ENSAPEP00000001267	ENSAPEP00000034972	ENSAPEP00000001267	ENSAPEP00000034972	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family.	0.488
ENSAPEP00000001267	SEMA6A	ENSAPEP00000001267	ENSAPEP00000027696	Sema domain-containing protein; Belongs to the semaphorin family.	Semaphorin 6A; Belongs to the semaphorin family.	0.488
ENSAPEP00000002344	ENSAPEP00000001267	ENSAPEP00000002344	ENSAPEP00000001267	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.488
ENSAPEP00000002344	ENSAPEP00000011842	ENSAPEP00000002344	ENSAPEP00000011842	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.488
ENSAPEP00000002344	ENSAPEP00000025003	ENSAPEP00000002344	ENSAPEP00000025003	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.488
ENSAPEP00000002344	ENSAPEP00000029796	ENSAPEP00000002344	ENSAPEP00000029796	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.488
ENSAPEP00000002344	SEMA4D	ENSAPEP00000002344	ENSAPEP00000023632	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.507
ENSAPEP00000003712	ENSAPEP00000013030	ENSAPEP00000003712	ENSAPEP00000013030	Uncharacterized protein; Belongs to the semaphorin family.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.532
ENSAPEP00000003712	ENSAPEP00000018121	ENSAPEP00000003712	ENSAPEP00000018121	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4e; Belongs to the semaphorin family.	0.532
ENSAPEP00000003712	SEMA4D	ENSAPEP00000003712	ENSAPEP00000023632	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.532
ENSAPEP00000006040	ENSAPEP00000013030	ENSAPEP00000006040	ENSAPEP00000013030	Uncharacterized protein; Belongs to the semaphorin family.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.532
ENSAPEP00000006040	ENSAPEP00000018121	ENSAPEP00000006040	ENSAPEP00000018121	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4e; Belongs to the semaphorin family.	0.532
ENSAPEP00000006040	SEMA4D	ENSAPEP00000006040	ENSAPEP00000023632	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.532
ENSAPEP00000007917	ENSAPEP00000001267	ENSAPEP00000007917	ENSAPEP00000001267	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.488
ENSAPEP00000007917	ENSAPEP00000011842	ENSAPEP00000007917	ENSAPEP00000011842	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.491
ENSAPEP00000007917	ENSAPEP00000025003	ENSAPEP00000007917	ENSAPEP00000025003	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.488