(20 nodes) Defense response to Gram-negative bacterium network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000000091	Interleukin 17a/f1. (160 aa)
	ENSAPEP00000029695	Uncharacterized protein. (474 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (291 aa)
	ENSAPEP00000022362	TNFR-Cys domain-containing protein. (258 aa)
	ENSAPEP00000022313	Uncharacterized protein. (299 aa)
	ENSAPEP00000020904	Tumor suppressor 2, mitochondrial calcium regulator b. (111 aa)
	ENSAPEP00000019975	Uncharacterized protein. (160 aa)
	IL12B-2	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (355 aa)
	ENSAPEP00000015346	Ribosomal protein L30. (116 aa)
	ENSAPEP00000015316	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (391 aa)
	ENSAPEP00000013859	Coagulation factor II (thrombin); Belongs to the peptidase S1 family. (587 aa)
	ENSAPEP00000010894	Uncharacterized protein. (1352 aa)
	ENSAPEP00000005484	Macrophage expressed 1, tandem duplicate 2. (704 aa)
	ENSAPEP00000004033	Tumor suppressor 2, mitochondrial calcium regulator a. (111 aa)
	ENSAPEP00000001595	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
	ENSAPEP00000001587	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (259 aa)
	ENSAPEP00000000642	Chromogranin A. (372 aa)
	ENSAPEP00000000090	annotation not available (136 aa)
	ENSAPEP00000000072	Interleukin 17a/f1. (160 aa)
	ENSAPEP00000000071	Uncharacterized protein. (136 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPEP00000000071	ENSAPEP00000000072	ENSAPEP00000000071	ENSAPEP00000000072	Uncharacterized protein.	Interleukin 17a/f1.	0.868
ENSAPEP00000000071	ENSAPEP00000000091	ENSAPEP00000000071	ENSAPEP00000000091	Uncharacterized protein.	Interleukin 17a/f1.	0.868
ENSAPEP00000000071	ENSAPEP00000019975	ENSAPEP00000000071	ENSAPEP00000019975	Uncharacterized protein.	Uncharacterized protein.	0.926
ENSAPEP00000000072	ENSAPEP00000000071	ENSAPEP00000000072	ENSAPEP00000000071	Interleukin 17a/f1.	Uncharacterized protein.	0.868
ENSAPEP00000000072	ENSAPEP00000000090	ENSAPEP00000000072	ENSAPEP00000000090	Interleukin 17a/f1.	annotation not available	0.868
ENSAPEP00000000072	ENSAPEP00000019975	ENSAPEP00000000072	ENSAPEP00000019975	Interleukin 17a/f1.	Uncharacterized protein.	0.873
ENSAPEP00000000090	ENSAPEP00000000072	ENSAPEP00000000090	ENSAPEP00000000072	annotation not available	Interleukin 17a/f1.	0.868
ENSAPEP00000000090	ENSAPEP00000000091	ENSAPEP00000000090	ENSAPEP00000000091	annotation not available	Interleukin 17a/f1.	0.868
ENSAPEP00000000090	ENSAPEP00000019975	ENSAPEP00000000090	ENSAPEP00000019975	annotation not available	Uncharacterized protein.	0.926
ENSAPEP00000000091	ENSAPEP00000000071	ENSAPEP00000000091	ENSAPEP00000000071	Interleukin 17a/f1.	Uncharacterized protein.	0.868
ENSAPEP00000000091	ENSAPEP00000000090	ENSAPEP00000000091	ENSAPEP00000000090	Interleukin 17a/f1.	annotation not available	0.868
ENSAPEP00000000091	ENSAPEP00000019975	ENSAPEP00000000091	ENSAPEP00000019975	Interleukin 17a/f1.	Uncharacterized protein.	0.873
ENSAPEP00000013859	ENSAPEP00000015316	ENSAPEP00000013859	ENSAPEP00000015316	Coagulation factor II (thrombin); Belongs to the peptidase S1 family.	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.	0.626
ENSAPEP00000015316	ENSAPEP00000013859	ENSAPEP00000015316	ENSAPEP00000013859	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.	Coagulation factor II (thrombin); Belongs to the peptidase S1 family.	0.626
ENSAPEP00000019975	ENSAPEP00000000071	ENSAPEP00000019975	ENSAPEP00000000071	Uncharacterized protein.	Uncharacterized protein.	0.926
ENSAPEP00000019975	ENSAPEP00000000072	ENSAPEP00000019975	ENSAPEP00000000072	Uncharacterized protein.	Interleukin 17a/f1.	0.873
ENSAPEP00000019975	ENSAPEP00000000090	ENSAPEP00000019975	ENSAPEP00000000090	Uncharacterized protein.	annotation not available	0.926
ENSAPEP00000019975	ENSAPEP00000000091	ENSAPEP00000019975	ENSAPEP00000000091	Uncharacterized protein.	Interleukin 17a/f1.	0.873
IL12B	IL12B-2	ENSAPEP00000022407	ENSAPEP00000016214	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.835
IL12B-2	IL12B	ENSAPEP00000016214	ENSAPEP00000022407	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.835