(5 nodes) Protein linear deubiquitination network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000028257	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (754 aa)
	ENSAPEP00000011330	Spermatogenesis associated 2. (566 aa)
	ENSAPEP00000014341	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (956 aa)
	ENSAPEP00000017904	OTU deubiquitinase with linear linkage specificity a. (731 aa)
	ENSAPEP00000034279	Cylindromatosis (turban tumor syndrome), b. (707 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000011330	ENSAPEP00000014341	Spermatogenesis associated 2.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.905
ENSAPEP00000011330	ENSAPEP00000028257	Spermatogenesis associated 2.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.905
ENSAPEP00000011330	ENSAPEP00000034279	Spermatogenesis associated 2.	Cylindromatosis (turban tumor syndrome), b.	0.905
ENSAPEP00000014341	ENSAPEP00000011330	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Spermatogenesis associated 2.	0.905
ENSAPEP00000014341	ENSAPEP00000028257	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.827
ENSAPEP00000014341	ENSAPEP00000034279	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), b.	0.834
ENSAPEP00000028257	ENSAPEP00000011330	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	Spermatogenesis associated 2.	0.905
ENSAPEP00000028257	ENSAPEP00000014341	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.827
ENSAPEP00000028257	ENSAPEP00000034279	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), b.	0.822
ENSAPEP00000034279	ENSAPEP00000011330	Cylindromatosis (turban tumor syndrome), b.	Spermatogenesis associated 2.	0.905
ENSAPEP00000034279	ENSAPEP00000014341	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.834
ENSAPEP00000034279	ENSAPEP00000028257	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.822