(14 nodes) SMN-Sm protein complex network (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAPEP00000003478	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (263 aa)
	ENSAPEP00000008672	Small nuclear ribonucleoprotein Sm D3. (108 aa)
	ENSAPEP00000008689	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	ENSAPEP00000015253	Gem (nuclear organelle) associated protein 7. (128 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (112 aa)
	ENSAPEP00000009308	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20. (809 aa)
	ENSAPEP00000008717	Gem (nuclear organelle) associated protein 5. (1450 aa)
	ENSAPEP00000024245	Small nuclear ribonucleoprotein G. (76 aa)
	ENSAPEP00000023223	Survival of motor neuron 1, telomeric. (283 aa)
	ENSAPEP00000021987	Gem (nuclear organelle) associated protein 8. (212 aa)
	ENSAPEP00000020949	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (114 aa)
	ENSAPEP00000001161	Uncharacterized protein. (173 aa)
	ENSAPEP00000002374	Serine/threonine kinase receptor associated protein. (329 aa)
	ENSAPEP00000004826	Gem (nuclear organelle) associated protein 4. (1144 aa)

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPEP00000001161	ENSAPEP00000002374	ENSAPEP00000001161	ENSAPEP00000002374	Uncharacterized protein.	Serine/threonine kinase receptor associated protein.	0.845
ENSAPEP00000001161	ENSAPEP00000003478	ENSAPEP00000001161	ENSAPEP00000003478	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.981
ENSAPEP00000001161	ENSAPEP00000004826	ENSAPEP00000001161	ENSAPEP00000004826	Uncharacterized protein.	Gem (nuclear organelle) associated protein 4.	0.943
ENSAPEP00000001161	ENSAPEP00000008672	ENSAPEP00000001161	ENSAPEP00000008672	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.818
ENSAPEP00000001161	ENSAPEP00000008689	ENSAPEP00000001161	ENSAPEP00000008689	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.818
ENSAPEP00000001161	ENSAPEP00000008717	ENSAPEP00000001161	ENSAPEP00000008717	Uncharacterized protein.	Gem (nuclear organelle) associated protein 5.	0.945
ENSAPEP00000001161	ENSAPEP00000009308	ENSAPEP00000001161	ENSAPEP00000009308	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20.	0.988
ENSAPEP00000001161	ENSAPEP00000015253	ENSAPEP00000001161	ENSAPEP00000015253	Uncharacterized protein.	Gem (nuclear organelle) associated protein 7.	0.936
ENSAPEP00000001161	ENSAPEP00000020949	ENSAPEP00000001161	ENSAPEP00000020949	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.967
ENSAPEP00000001161	ENSAPEP00000021987	ENSAPEP00000001161	ENSAPEP00000021987	Uncharacterized protein.	Gem (nuclear organelle) associated protein 8.	0.946
ENSAPEP00000001161	ENSAPEP00000024245	ENSAPEP00000001161	ENSAPEP00000024245	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.966
ENSAPEP00000001161	SNRPD1	ENSAPEP00000001161	ENSAPEP00000017530	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.967
ENSAPEP00000002374	ENSAPEP00000001161	ENSAPEP00000002374	ENSAPEP00000001161	Serine/threonine kinase receptor associated protein.	Uncharacterized protein.	0.845
ENSAPEP00000002374	ENSAPEP00000003478	ENSAPEP00000002374	ENSAPEP00000003478	Serine/threonine kinase receptor associated protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.660
ENSAPEP00000002374	ENSAPEP00000004826	ENSAPEP00000002374	ENSAPEP00000004826	Serine/threonine kinase receptor associated protein.	Gem (nuclear organelle) associated protein 4.	0.805
ENSAPEP00000002374	ENSAPEP00000008717	ENSAPEP00000002374	ENSAPEP00000008717	Serine/threonine kinase receptor associated protein.	Gem (nuclear organelle) associated protein 5.	0.816
ENSAPEP00000002374	ENSAPEP00000009308	ENSAPEP00000002374	ENSAPEP00000009308	Serine/threonine kinase receptor associated protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20.	0.992
ENSAPEP00000002374	ENSAPEP00000015253	ENSAPEP00000002374	ENSAPEP00000015253	Serine/threonine kinase receptor associated protein.	Gem (nuclear organelle) associated protein 7.	0.947
ENSAPEP00000002374	ENSAPEP00000020949	ENSAPEP00000002374	ENSAPEP00000020949	Serine/threonine kinase receptor associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.406
ENSAPEP00000002374	ENSAPEP00000021987	ENSAPEP00000002374	ENSAPEP00000021987	Serine/threonine kinase receptor associated protein.	Gem (nuclear organelle) associated protein 8.	0.875