STRINGSTRING
AJT41150.1 AJT41150.1 AJT42744.1 AJT42744.1 AJT40416.1 AJT40416.1 purE purE AJT40454.1 AJT40454.1 truB truB AJT40580.1 AJT40580.1 dapF dapF hisA hisA AJT40671.1 AJT40671.1 AJT40726.1 AJT40726.1 AJT40763.1 AJT40763.1 AJT40810.1 AJT40810.1 tpiA tpiA AJT40872.1 AJT40872.1 AJT40886.1 AJT40886.1 AJT40934.1 AJT40934.1 AJT40966.1 AJT40966.1 AJT41048.1 AJT41048.1 tig tig nnrD nnrD glmM glmM truA truA AJT41767.1 AJT41767.1 AJT41876.1 AJT41876.1 topA topA AJT42089.1 AJT42089.1 AJT43108.1 AJT43108.1 AJT42110.1 AJT42110.1 manB manB AJT42152.1 AJT42152.1 AJT42226.1 AJT42226.1 AJT42250.1 AJT42250.1 gyrA gyrA gyrB gyrB AJT43149.1 AJT43149.1 AJT42341.1 AJT42341.1 pheA pheA AJT42510.1 AJT42510.1 AJT42570.1 AJT42570.1 gpmA gpmA AJT42618.1 AJT42618.1 groEL-2 groEL-2 AJT42677.1 AJT42677.1 AJT42698.1 AJT42698.1 AJT41269.1 AJT41269.1 murI murI nagB nagB AJT41428.1 AJT41428.1 AJT41449.1 AJT41449.1 AJT42973.1 AJT42973.1 hemL hemL groEL groEL AJT41655.1 AJT41655.1 AJT41661.1 AJT41661.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJT41150.1Catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AJT42744.1Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AJT40416.1Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
purEPhosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (191 aa)
AJT40454.1Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (307 aa)
AJT40580.1Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (306 aa)
hisAPhosphoribosyl isomerase; Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AJT40671.1Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. (324 aa)
AJT40726.1Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (313 aa)
AJT40763.1DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (703 aa)
AJT40810.1Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. (227 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (271 aa)
AJT40872.1Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family. (538 aa)
AJT40886.1UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)
AJT40934.1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
AJT40966.1Cyclophilin; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
AJT41048.1AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
tigTrigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (469 aa)
nnrDSugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of [...] (480 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (450 aa)
truAPseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (301 aa)
AJT41767.1Fatty acid-binding protein; May play a role in the intracellular transport of hydrophobic ligands. (205 aa)
AJT41876.1Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (900 aa)
AJT42089.1Hypothetical protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (376 aa)
AJT43108.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
AJT42110.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
manBPhosphomannomutase; Converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
AJT42152.1Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
AJT42226.1UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (375 aa)
AJT42250.1Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (180 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (863 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (679 aa)
AJT43149.1Proline racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family. (324 aa)
AJT42341.1Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
pheAPrephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
AJT42510.1Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
AJT42570.1DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (248 aa)
AJT42618.1DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
groEL-2Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (545 aa)
AJT42677.15-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
AJT42698.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (364 aa)
AJT41269.1Arylmalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (308 aa)
nagBGlucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. (260 aa)
AJT41428.1UDP-galactopyranose mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
AJT41449.1Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
AJT42973.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (228 aa)
hemLGlutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
groELMolecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (537 aa)
AJT41655.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (388 aa)
AJT41661.1Inositol-3-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
Your Current Organism:
Psychromicrobium lacuslunae
NCBI taxonomy Id: 1618207
Other names: Arthrobacter sp. IHBB 11108, JCM 31143, KACC 19070, MCC 2780, MTCC 12460, P. lacuslunae, strain IHBB 11108
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