(9 nodes) Zinc-binding dehydrogenase network (Psychromicrobium lacuslunae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJT42439.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AJT40381.1	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
	AJT40556.1	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	AJT40618.1	NADPH--quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AJT41822.1	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AJT41905.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	AJT42059.1	IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	AJT42069.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
	AJT42093.1	NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)

Your Current Organism:

Psychromicrobium lacuslunae

NCBI taxonomy Id: 1618207
Other names: Arthrobacter sp. IHBB 11108, JCM 31143, KACC 19070, MCC 2780, MTCC 12460, P. lacuslunae, strain IHBB 11108

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJT40381.1	AJT41822.1	UM93_00300	UM93_10400	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
AJT40381.1	AJT41905.1	UM93_00300	UM93_10960	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJT40381.1	AJT42439.1	UM93_00300	UM93_14740	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
AJT41822.1	AJT40381.1	UM93_10400	UM93_00300	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
AJT41905.1	AJT40381.1	UM93_10960	UM93_00300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AJT42439.1	AJT40381.1	UM93_14740	UM93_00300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587