STRINGSTRING
tnpRC tnpRC tnpRN tnpRN tnpA3 tnpA3 AJI77963.1 AJI77963.1 resB resB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tnpRCResolvase family protein; PFAM: Resolvase, N terminal domain. (108 aa)
tnpRNResolvase family protein; PFAM: Resolvase, N terminal domain. (135 aa)
tnpA3Transposase, TnpA family; PFAM: Domain of unknown function (DUF4158); Tn3 transposase DDE domain. (961 aa)
AJI77963.1Integrase family protein; PFAM: Integrase core domain; leucine-zipper of insertion element IS481. (297 aa)
resBSite-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase. (353 aa)
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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