Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARJ05126.1 | ARJ05127.1 | B5808_07835 | B5808_07840 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.824 |
| ARJ05126.1 | whiB-2 | B5808_07835 | B5808_12655 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.432 |
| ARJ05127.1 | ARJ05126.1 | B5808_07840 | B5808_07835 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.824 |
| ARJ05127.1 | ARJ05644.1 | B5808_07840 | B5808_10730 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.726 |
| ARJ05127.1 | ARJ06313.1 | B5808_07840 | B5808_14645 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
| ARJ05127.1 | nucS | B5808_07840 | B5808_00170 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.682 |
| ARJ05127.1 | whiB | B5808_07840 | B5808_12550 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.774 |
| ARJ05127.1 | whiB-2 | B5808_07840 | B5808_12655 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.844 |
| ARJ05644.1 | ARJ05127.1 | B5808_10730 | B5808_07840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.726 |
| ARJ05644.1 | nucS | B5808_10730 | B5808_00170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.629 |
| ARJ05644.1 | whiB | B5808_10730 | B5808_12550 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.766 |
| ARJ05644.1 | whiB-2 | B5808_10730 | B5808_12655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.708 |
| ARJ06313.1 | ARJ05127.1 | B5808_14645 | B5808_07840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
| ARJ06313.1 | nucS | B5808_14645 | B5808_00170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.626 |
| ARJ06313.1 | whiB | B5808_14645 | B5808_12550 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.551 |
| ARJ06313.1 | whiB-2 | B5808_14645 | B5808_12655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.521 |
| nucS | ARJ05127.1 | B5808_00170 | B5808_07840 | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.682 |
| nucS | ARJ05644.1 | B5808_00170 | B5808_10730 | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
| nucS | ARJ06313.1 | B5808_00170 | B5808_14645 | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| nucS | whiB | B5808_00170 | B5808_12550 | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.731 |
page 1 of 2