Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARJ04458.1 | ARJ05011.1 | B5808_03885 | B5808_07180 | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.893 |
| ARJ04458.1 | ARJ06308.1 | B5808_03885 | B5808_14620 | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| ARJ04458.1 | ARJ07267.1 | B5808_03885 | B5808_07135 | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.837 |
| ARJ04458.1 | ARJ07401.1 | B5808_03885 | B5808_14145 | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.607 |
| ARJ05011.1 | ARJ04458.1 | B5808_07180 | B5808_03885 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.893 |
| ARJ05011.1 | ARJ06308.1 | B5808_07180 | B5808_14620 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| ARJ05011.1 | ARJ07267.1 | B5808_07180 | B5808_07135 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.889 |
| ARJ05011.1 | ARJ07401.1 | B5808_07180 | B5808_14145 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| ARJ05011.1 | ku | B5808_07180 | B5808_14615 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.930 |
| ARJ06308.1 | ARJ04458.1 | B5808_14620 | B5808_03885 | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| ARJ06308.1 | ARJ05011.1 | B5808_14620 | B5808_07180 | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| ARJ06308.1 | ARJ07267.1 | B5808_14620 | B5808_07135 | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
| ARJ06308.1 | ARJ07401.1 | B5808_14620 | B5808_14145 | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
| ARJ06308.1 | ku | B5808_14620 | B5808_14615 | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.987 |
| ARJ07267.1 | ARJ04458.1 | B5808_07135 | B5808_03885 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.837 |
| ARJ07267.1 | ARJ05011.1 | B5808_07135 | B5808_07180 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.889 |
| ARJ07267.1 | ARJ06308.1 | B5808_07135 | B5808_14620 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
| ARJ07401.1 | ARJ04458.1 | B5808_14145 | B5808_03885 | DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.607 |
| ARJ07401.1 | ARJ05011.1 | B5808_14145 | B5808_07180 | DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| ARJ07401.1 | ARJ06308.1 | B5808_14145 | B5808_14620 | DNA polymerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
page 1 of 2