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ARJ04567.1 ARJ04567.1 rpsM rpsM ARJ04774.1 ARJ04774.1 ARJ04900.1 ARJ04900.1 gmk gmk ARJ05845.1 ARJ05845.1 ARJ06075.1 ARJ06075.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARJ04567.1DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (125 aa)
ARJ04774.1Endonuclease VIII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (286 aa)
ARJ04900.1DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (333 aa)
gmkGuanylate kinase; Essential for recycling GMP and indirectly, cGMP. (302 aa)
ARJ05845.1DNA-formamidopyrimidine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (337 aa)
ARJ06075.1Endonuclease VIII; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
Your Current Organism:
Cnuibacter physcomitrellae
NCBI taxonomy Id: 1619308
Other names: C. physcomitrellae, CGMCC 1.15041, Cnuibacter physcomitrellae Zhou et al. 2016, DSM 29843, Microbacteriaceae bacterium XA, strain XA
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