STRINGSTRING
ARJ07058.1 ARJ07058.1 ARJ03925.1 ARJ03925.1 ARJ03926.1 ARJ03926.1 ARJ03982.1 ARJ03982.1 ARJ04180.1 ARJ04180.1 menD menD ARJ05223.1 ARJ05223.1 ARJ07296.1 ARJ07296.1 dxs dxs ARJ05512.1 ARJ05512.1 ARJ05624.1 ARJ05624.1 ARJ05760.1 ARJ05760.1 ARJ05830.1 ARJ05830.1 ARJ05950.1 ARJ05950.1 ARJ06027.1 ARJ06027.1 ARJ06481.1 ARJ06481.1 ARJ06668.1 ARJ06668.1 ARJ06718.1 ARJ06718.1 ARJ07499.1 ARJ07499.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARJ07058.1Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
ARJ03925.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
ARJ03926.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
ARJ03982.1Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (550 aa)
ARJ04180.1Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (557 aa)
menD2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. (581 aa)
ARJ05223.1Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
ARJ07296.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. (697 aa)
dxs1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (645 aa)
ARJ05512.1Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (908 aa)
ARJ05624.12-oxoglutarate dehydrogenase E1 component; Derived by automated computational analysis using gene prediction method: Protein Homology. (1261 aa)
ARJ05760.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
ARJ05830.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
ARJ05950.1Acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
ARJ06027.1Pyruvate oxidase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (577 aa)
ARJ06481.1Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa)
ARJ06668.1Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (616 aa)
ARJ06718.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (731 aa)
ARJ07499.1Alpha-ketoacid dehydrogenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
Your Current Organism:
Cnuibacter physcomitrellae
NCBI taxonomy Id: 1619308
Other names: C. physcomitrellae, CGMCC 1.15041, Cnuibacter physcomitrellae Zhou et al. 2016, DSM 29843, Microbacteriaceae bacterium XA, strain XA
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