STRINGSTRING
lig lig ARJ04567.1 ARJ04567.1 ARJ04774.1 ARJ04774.1 ligA ligA ARJ04900.1 ARJ04900.1 ARJ04979.1 ARJ04979.1 ARJ05055.1 ARJ05055.1 polA polA ARJ07311.1 ARJ07311.1 ung ung ARJ05845.1 ARJ05845.1 ARJ06060.1 ARJ06060.1 ARJ06075.1 ARJ06075.1 ARJ07391.1 ARJ07391.1 ARJ06650.1 ARJ06650.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ligATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (510 aa)
ARJ04567.1DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ARJ04774.1Endonuclease VIII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (286 aa)
ligADNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (790 aa)
ARJ04900.1DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (333 aa)
ARJ04979.13-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (209 aa)
ARJ05055.13-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (892 aa)
ARJ07311.1Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
unguracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (230 aa)
ARJ05845.1DNA-formamidopyrimidine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (337 aa)
ARJ06060.1Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
ARJ06075.1Endonuclease VIII; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
ARJ07391.1Bifunctional 3'-5' exonuclease/DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
ARJ06650.1Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
Your Current Organism:
Cnuibacter physcomitrellae
NCBI taxonomy Id: 1619308
Other names: C. physcomitrellae, CGMCC 1.15041, Cnuibacter physcomitrellae Zhou et al. 2016, DSM 29843, Microbacteriaceae bacterium XA, strain XA
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.