STRINGSTRING
rbsD rbsD rbsA rbsA rbsC rbsC rbsB rbsB CUU23112.1 CUU23112.1 CUU23113.1 CUU23113.1 CUU23114.1 CUU23114.1 CUU23788.1 CUU23788.1 ytfQ ytfQ ytfR ytfR ytfT ytfT yjfF yjfF araF araF araG araG araH araH araC araC ydgJ ydgJ CUU24515.1 CUU24515.1 CUU24516.1 CUU24516.1 rbsA-2 rbsA-2 CUU24538.1 CUU24538.1 rbsA-3 rbsA-3 mocB mocB mglC mglC mglA mglA mglB mglB xylB xylB xylA xylA xylF xylF xylG xylG xylH xylH xylR xylR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbsDHigh affinity ribose transport protein rbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (139 aa)
rbsAATP-binding component of D-ribose high-affinity transport system; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (517 aa)
rbsCRibose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
rbsBABC-type sugar transport system, periplasmic component (rbsB). (291 aa)
CUU23112.1Putative ABC transport system, periplasmic solute-binding protein precursor. (354 aa)
CUU23113.1Putative ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
CUU23114.1Putative ABC transport system, ATP-binding protein. (501 aa)
CUU23788.1Periplasmic binding protein/LacI transcriptional regulator. (305 aa)
ytfQPutative ABC transport system, periplasmic solute-binding protein precursor. (318 aa)
ytfRPutative ABC transport system, ATP-binding protein. (504 aa)
ytfTPutative ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (339 aa)
yjfFPutative ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
araFL-arabinose-binding periplasmic protein precursor. (327 aa)
araGL-arabinose transport ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (506 aa)
araHHigh-affinity L-arabinose transporter, permease protein AraH; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
araCArabinose operon regulatory protein. (302 aa)
ydgJPutative oxidoreductase YdgJ. (348 aa)
CUU24515.1HTH-type transcriptional repressor purR. (312 aa)
CUU24516.1Putative ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
rbsA-2Putative ABC transport system, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (503 aa)
CUU24538.1Putative ABC transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
rbsA-3Putative ABC transport system, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (494 aa)
mocBPutative rhizopine-binding protein. (307 aa)
mglCGalactoside transport system permease protein mglC. (336 aa)
mglAATP-binding component of methyl-galactoside transport and galactose taxis. (506 aa)
mglBD-galactose-binding periplasmic protein precursor. (331 aa)
xylBXylulokinase. (488 aa)
xylAD-xylose isomerase; Belongs to the xylose isomerase family. (440 aa)
xylFD-galactose-binding periplasmic protein precursor. (330 aa)
xylGATP-binding protein of xylose transport system; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (509 aa)
xylHXylose transport system permease protein xylH; Belongs to the binding-protein-dependent transport system permease family. (391 aa)
xylRXylose operon regulatory protein (repressor). (417 aa)
Your Current Organism:
Erwinia gerundensis
NCBI taxonomy Id: 1619313
Other names: CCOS 903, CCOS:903, E. gerundensis, Erwinia gerundensis Rezzonico et al. 2016, Erwinia sp. 08-046A, Erwinia sp. 08-069A, Erwinia sp. 08-085C, Erwinia sp. 6-RJ-7B, Erwinia sp. EM406, Erwinia sp. EM436, Erwinia sp. EM477, Erwinia sp. EM486, Erwinia sp. EM573, Erwinia sp. EM595, Erwinia sp. EM603, Erwinia sp. KAZ28, LMG 28990, LMG:28990, Pantoea sp. EM486, Pantoea sp. EM595, Pantoea sp. P10QLC, Pantoea sp. P8SAA, strain EM595
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