STRINGSTRING
livJ livJ livH livH livM livM livG livG livF livF CUU22886.1 CUU22886.1 CUU22887.1 CUU22887.1 CUU22888.1 CUU22888.1 CUU22889.1 CUU22889.1 CUU22890.1 CUU22890.1 CUU22891.1 CUU22891.1 DUR1,2 DUR1,2 atzF atzF CUU23394.1 CUU23394.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
livJLeu/Ile/Val-binding 2 precursor-like protein. (371 aa)
livHHigh-affinity branched-chain amino acid transport system permease protein livH; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
livMHigh-affinity branched-chain amino acid transport system permease protein livM; Belongs to the binding-protein-dependent transport system permease family. (422 aa)
livGHigh-affinity branched-chain amino acid transport ATP-binding protein livG. (255 aa)
livFPhosphate import ATP-binding protein pstB; Belongs to the ABC transporter superfamily. (237 aa)
CUU22886.1Putative ABC transport system, ATP-binding protein. (232 aa)
CUU22887.1Putative ABC transport system, ATP-binding protein. (263 aa)
CUU22888.1Putative ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
CUU22889.1Putative ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (520 aa)
CUU22890.1Putative ABC transport system, periplasmic solute-binding protein precursor. (422 aa)
CUU22891.1GntR family transcriptional regulator. (235 aa)
DUR1,2Urea amidolyase. (1205 aa)
atzFAllophanate hydrolase. (599 aa)
CUU23394.1Putative ABC transport system, ATPase-binding component. (237 aa)
Your Current Organism:
Erwinia gerundensis
NCBI taxonomy Id: 1619313
Other names: CCOS 903, CCOS:903, E. gerundensis, Erwinia gerundensis Rezzonico et al. 2016, Erwinia sp. 08-046A, Erwinia sp. 08-069A, Erwinia sp. 08-085C, Erwinia sp. 6-RJ-7B, Erwinia sp. EM406, Erwinia sp. EM436, Erwinia sp. EM477, Erwinia sp. EM486, Erwinia sp. EM573, Erwinia sp. EM595, Erwinia sp. EM603, Erwinia sp. KAZ28, LMG 28990, LMG:28990, Pantoea sp. EM486, Pantoea sp. EM595, Pantoea sp. P10QLC, Pantoea sp. P8SAA, strain EM595
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