STRINGSTRING
rbsB rbsB CUU23112.1 CUU23112.1 CUU23788.1 CUU23788.1 araF araF CUU24010.1 CUU24010.1 CUU24515.1 CUU24515.1 mocB mocB mglB mglB CUU25213.1 CUU25213.1 xylF xylF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbsBABC-type sugar transport system, periplasmic component (rbsB). (291 aa)
CUU23112.1Putative ABC transport system, periplasmic solute-binding protein precursor. (354 aa)
CUU23788.1Periplasmic binding protein/LacI transcriptional regulator. (305 aa)
araFL-arabinose-binding periplasmic protein precursor. (327 aa)
CUU24010.1Transcriptional regulator. (340 aa)
CUU24515.1HTH-type transcriptional repressor purR. (312 aa)
mocBPutative rhizopine-binding protein. (307 aa)
mglBD-galactose-binding periplasmic protein precursor. (331 aa)
CUU25213.1Cytochrome C peroxidase. (353 aa)
xylFD-galactose-binding periplasmic protein precursor. (330 aa)
Your Current Organism:
Erwinia gerundensis
NCBI taxonomy Id: 1619313
Other names: CCOS 903, CCOS:903, E. gerundensis, Erwinia gerundensis Rezzonico et al. 2016, Erwinia sp. 08-046A, Erwinia sp. 08-069A, Erwinia sp. 08-085C, Erwinia sp. 6-RJ-7B, Erwinia sp. EM406, Erwinia sp. EM436, Erwinia sp. EM477, Erwinia sp. EM486, Erwinia sp. EM573, Erwinia sp. EM595, Erwinia sp. EM603, Erwinia sp. KAZ28, LMG 28990, LMG:28990, Pantoea sp. EM486, Pantoea sp. EM595, Pantoea sp. P10QLC, Pantoea sp. P8SAA, strain EM595
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