STRINGSTRING
CUU24514.1 CUU24514.1 CUU24518.1 CUU24518.1 baeR baeR CUU25247.1 CUU25247.1 rcsB rcsB rcsC rcsC tctD tctD ypdB ypdB CUU25254.1 CUU25254.1 yfhA yfhA CUU24842.1 CUU24842.1 CUU25217.1 CUU25217.1 qseB qseB glnG glnG barA barA cpxR cpxR ompR ompR arcB arcB CUU22795.1 CUU22795.1 arcA arcA phoB phoB CUU23370.1 CUU23370.1 CUU23371.1 CUU23371.1 CUU23410.1 CUU23410.1 uvrY uvrY CUU23635.1 CUU23635.1 CUU23636.1 CUU23636.1 CUU23637.1 CUU23637.1 phoP phoP cheV cheV CUU23745.1 CUU23745.1 rstA rstA CUU25255.1 CUU25255.1 rrsB rrsB cheY cheY cheB cheB basR basR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CUU24514.1OmpR. (250 aa)
CUU24518.1Hypothetical protein. (853 aa)
baeRTranscriptional regulatory protein BaeR. (235 aa)
CUU25247.1LuxR family transcriptional regulator. (233 aa)
rcsBCapsule synthesis two component response regulator rcsB; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. (217 aa)
rcsCTwo component sensor kinase/response regulator protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (948 aa)
tctDTranscriptional regulatory protein tctD. (223 aa)
ypdBTranscriptional regulatory protein YpdB. (242 aa)
CUU25254.1Diguanylate cyclase. (1201 aa)
yfhAPutative 2-component transcriptional regulator yfhA. (444 aa)
CUU24842.1Winged helix family two component transcriptional regulator. (226 aa)
CUU25217.1Response regulator. (206 aa)
qseBTranscriptional regulatory protein QseB. (220 aa)
glnGTranscriptional regulatory protein glnG; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (469 aa)
barAHybrid sensory histidine kinase. (908 aa)
cpxRTranscriptional regulatory protein CpxR. (231 aa)
ompRTwo-component response regulator ompR. (239 aa)
arcBAerobic respiration control sensor protein. (800 aa)
CUU22795.1Hypothetical protein. (205 aa)
arcAAerobic respiration control protein ArcA. (238 aa)
phoBPhosphate regulon transcriptional regulatory protein phoB. (229 aa)
CUU23370.1Hypothetical protein. (1037 aa)
CUU23371.1Putative two-component response regulator precursor. (196 aa)
CUU23410.1LuxR family transcriptional regulator. (224 aa)
uvrYPutative 2-component transcriptional regulator. (219 aa)
CUU23635.1Hypothetical protein. (1061 aa)
CUU23636.1Hypothetical protein. (1066 aa)
CUU23637.1Response regulator. (233 aa)
phoPResponse regulator. (222 aa)
cheVPutative chemotaxis signal transduction protein. (325 aa)
CUU23745.1Hypothetical protein. (230 aa)
rstATranscriptional regulatory protein RstA. (238 aa)
CUU25255.1LuxR family transcriptional regulator. (207 aa)
rrsBRrsB; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. (337 aa)
cheYChemotaxis protein cheY. (129 aa)
cheBChemotaxis response regulator, CheB type; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa)
basRTranscriptional regulatory protein BasR. (227 aa)
Your Current Organism:
Erwinia gerundensis
NCBI taxonomy Id: 1619313
Other names: CCOS 903, CCOS:903, E. gerundensis, Erwinia gerundensis Rezzonico et al. 2016, Erwinia sp. 08-046A, Erwinia sp. 08-069A, Erwinia sp. 08-085C, Erwinia sp. 6-RJ-7B, Erwinia sp. EM406, Erwinia sp. EM436, Erwinia sp. EM477, Erwinia sp. EM486, Erwinia sp. EM573, Erwinia sp. EM595, Erwinia sp. EM603, Erwinia sp. KAZ28, LMG 28990, LMG:28990, Pantoea sp. EM486, Pantoea sp. EM595, Pantoea sp. P10QLC, Pantoea sp. P8SAA, strain EM595
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