STRINGSTRING
glnA glnA argG argG argH argH CUU22426.1 CUU22426.1 sad sad gabD gabD gltD gltD gltB gltB pyrI pyrI pyrB pyrB carA carA carB carB yafV yafV asnB asnB glsA glsA ybiK ybiK aspC aspC CUU23578.1 CUU23578.1 purB purB puuE puuE ansA ansA putA putA gabT gabT alaA alaA purF purF nadB nadB purA purA aspA aspA glmS glmS
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glnAGlutamine synthetase. (469 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (449 aa)
argHArgininosuccinate lyase. (461 aa)
CUU22426.1Aspartate racemase; Belongs to the aspartate/glutamate racemases family. (247 aa)
sadSuccinate semialdehyde dehydrogenase [NAD(P)+] Sad. (459 aa)
gabDSuccinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (483 aa)
gltDGlutamate synthase [NADPH] small chain. (472 aa)
gltBGlutamate synthase [NADPH] large chain. (1489 aa)
pyrIAspartate carbamoyltransferase regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase. (154 aa)
pyrBAspartate carbamoyltransferase, catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa)
carACarbamoyl-phosphate synthase small chain; Belongs to the CarA family. (396 aa)
carBCarbamoyl-phosphate synthase large chain; Belongs to the CarB family. (1074 aa)
yafVUPF0012 hydrolase YafV. (255 aa)
asnBAsparagine synthetase B. (554 aa)
glsAGlutaminase; Belongs to the glutaminase family. (328 aa)
ybiKPutative asparaginase. (317 aa)
aspCAspartate aminotransferase. (400 aa)
CUU23578.1Putative NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (458 aa)
purBAdenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (456 aa)
puuE4-aminobutyrate aminotransferase PuuE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (428 aa)
ansACytoplasmic L-asparaginase I. (338 aa)
putA1-pyrroline-5-carboxylate dehydrogenase / proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. (1314 aa)
gabT4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (432 aa)
alaAGlutamate-pyruvate aminotransferase AlaA. (437 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (505 aa)
nadBL-aspartate oxidase (Quinolinate synthetase B); Catalyzes the oxidation of L-aspartate to iminoaspartate. (539 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (432 aa)
aspAAspartate ammonia-lyase. (478 aa)
glmSGlucosamine-fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (609 aa)
Your Current Organism:
Erwinia gerundensis
NCBI taxonomy Id: 1619313
Other names: CCOS 903, CCOS:903, E. gerundensis, Erwinia gerundensis Rezzonico et al. 2016, Erwinia sp. 08-046A, Erwinia sp. 08-069A, Erwinia sp. 08-085C, Erwinia sp. 6-RJ-7B, Erwinia sp. EM406, Erwinia sp. EM436, Erwinia sp. EM477, Erwinia sp. EM486, Erwinia sp. EM573, Erwinia sp. EM595, Erwinia sp. EM603, Erwinia sp. KAZ28, LMG 28990, LMG:28990, Pantoea sp. EM486, Pantoea sp. EM595, Pantoea sp. P10QLC, Pantoea sp. P8SAA, strain EM595
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