Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KYL35453.1 | KYL35455.1 | A2I98_06770 | A2I98_06780 | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35453.1 | KYL35458.1 | A2I98_06770 | A2I98_06800 | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35453.1 | rpmD | A2I98_06770 | A2I98_06760 | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35453.1 | rpmJ-2 | A2I98_06770 | A2I98_06745 | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35453.1 | secY | A2I98_06770 | A2I98_06750 | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; Forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35455.1 | KYL35453.1 | A2I98_06780 | A2I98_06770 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35455.1 | KYL35458.1 | A2I98_06780 | A2I98_06800 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35455.1 | rpmD | A2I98_06780 | A2I98_06760 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35455.1 | rpmJ-2 | A2I98_06780 | A2I98_06745 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35455.1 | secY | A2I98_06780 | A2I98_06750 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; Forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35458.1 | KYL35453.1 | A2I98_06800 | A2I98_06770 | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35458.1 | KYL35455.1 | A2I98_06800 | A2I98_06780 | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35458.1 | rpmD | A2I98_06800 | A2I98_06760 | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35458.1 | rpmJ-2 | A2I98_06800 | A2I98_06745 | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KYL35458.1 | secY | A2I98_06800 | A2I98_06750 | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; Forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpmD | KYL35453.1 | A2I98_06760 | A2I98_06770 | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpmD | KYL35455.1 | A2I98_06760 | A2I98_06780 | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpmD | KYL35458.1 | A2I98_06760 | A2I98_06800 | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpmD | rpmJ-2 | A2I98_06760 | A2I98_06745 | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| rpmD | secY | A2I98_06760 | A2I98_06750 | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; Forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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