Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A2I98_06730 | A2I98_13910 | A2I98_06730 | A2I98_13910 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL32174.1 | A2I98_06730 | A2I98_18445 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL32175.1 | A2I98_06730 | A2I98_18450 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL32176.1 | A2I98_06730 | A2I98_18455 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL32575.1 | A2I98_06730 | A2I98_16640 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL32576.1 | A2I98_06730 | A2I98_16645 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL32581.1 | A2I98_06730 | A2I98_16670 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL35153.1 | A2I98_06730 | A2I98_08085 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.976 |
| A2I98_06730 | KYL35450.1 | A2I98_06730 | A2I98_06755 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL35452.1 | A2I98_06730 | A2I98_06765 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | KYL35458.1 | A2I98_06730 | A2I98_06800 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | rpmD | A2I98_06730 | A2I98_06760 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_06730 | rpmF | A2I98_06730 | A2I98_19165 | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| A2I98_13910 | A2I98_06730 | A2I98_13910 | A2I98_06730 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; Catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_13910 | KYL32174.1 | A2I98_13910 | A2I98_18445 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_13910 | KYL32175.1 | A2I98_13910 | A2I98_18450 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_13910 | KYL32176.1 | A2I98_13910 | A2I98_18455 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_13910 | KYL32575.1 | A2I98_13910 | A2I98_16640 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_13910 | KYL32576.1 | A2I98_13910 | A2I98_16645 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| A2I98_13910 | KYL32581.1 | A2I98_13910 | A2I98_16670 | Type I methionyl aminopeptidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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