13 items (Pseudogymnoascus sp. WSF3629) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VE00_11005	Uncharacterized protein. (156 aa)
	VE00_08846	Serine/threonine-protein phosphatase. (574 aa)
	VE00_09210	Peptidylprolyl isomerase. (183 aa)
	VE00_08655	ANK_REP_REGION domain-containing protein. (365 aa)
	VE00_07455	Uncharacterized protein. (381 aa)
	VE00_07945	EF-hand domain-containing protein. (2144 aa)
	VE00_04508	Peptidylprolyl isomerase. (111 aa)
	VE00_04152	Protein kinase domain-containing protein. (312 aa)
	VE00_05087	Calmodulin; Belongs to the calmodulin family. (149 aa)
	VE00_02410	Uncharacterized protein. (1368 aa)
	VE00_02958	CAMK/CAMK1 protein kinase; Belongs to the protein kinase superfamily. (402 aa)
	VE00_00965	Calcineurin subunit B. (174 aa)
	VE00_00576	Uncharacterized protein. (189 aa)

Your Current Organism:

Pseudogymnoascus sp. WSF3629

NCBI taxonomy Id: 1622147
Other names: P. sp. WSF 3629, Pseudogymnoascus sp. WSF 3629

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VE00_00576	VE00_02410	A0A1B8CPQ2	A0A1B8CJH2	Uncharacterized protein.	Uncharacterized protein.	0.406
VE00_00576	VE00_02958	A0A1B8CPQ2	A0A1B8CL36	Uncharacterized protein.	CAMK/CAMK1 protein kinase; Belongs to the protein kinase superfamily.	0.611
VE00_00576	VE00_04152	A0A1B8CPQ2	A0A1B8CDZ6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.999
VE00_00576	VE00_04508	A0A1B8CPQ2	A0A1B8CB86	Uncharacterized protein.	Peptidylprolyl isomerase.	0.621
VE00_00576	VE00_05087	A0A1B8CPQ2	A0A1B8CF87	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.414
VE00_00576	VE00_07455	A0A1B8CPQ2	A0A1B8C5E1	Uncharacterized protein.	Uncharacterized protein.	0.784
VE00_00576	VE00_07945	A0A1B8CPQ2	A0A1B8C6U3	Uncharacterized protein.	EF-hand domain-containing protein.	0.635
VE00_00576	VE00_08655	A0A1B8CPQ2	A0A1B8C3W6	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.776
VE00_00576	VE00_08846	A0A1B8CPQ2	A0A1B8C002	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.727
VE00_00576	VE00_09210	A0A1B8CPQ2	A0A1B8C0R6	Uncharacterized protein.	Peptidylprolyl isomerase.	0.621
VE00_00576	VE00_11005	A0A1B8CPQ2	A0A1B8BVZ1	Uncharacterized protein.	Uncharacterized protein.	0.414
VE00_00965	VE00_02410	A0A1B8CMT1	A0A1B8CJH2	Calcineurin subunit B.	Uncharacterized protein.	0.408
VE00_00965	VE00_02958	A0A1B8CMT1	A0A1B8CL36	Calcineurin subunit B.	CAMK/CAMK1 protein kinase; Belongs to the protein kinase superfamily.	0.702
VE00_00965	VE00_04152	A0A1B8CMT1	A0A1B8CDZ6	Calcineurin subunit B.	Protein kinase domain-containing protein.	0.999
VE00_00965	VE00_04508	A0A1B8CMT1	A0A1B8CB86	Calcineurin subunit B.	Peptidylprolyl isomerase.	0.990
VE00_00965	VE00_05087	A0A1B8CMT1	A0A1B8CF87	Calcineurin subunit B.	Calmodulin; Belongs to the calmodulin family.	0.754
VE00_00965	VE00_07455	A0A1B8CMT1	A0A1B8C5E1	Calcineurin subunit B.	Uncharacterized protein.	0.787
VE00_00965	VE00_07945	A0A1B8CMT1	A0A1B8C6U3	Calcineurin subunit B.	EF-hand domain-containing protein.	0.793
VE00_00965	VE00_08655	A0A1B8CMT1	A0A1B8C3W6	Calcineurin subunit B.	ANK_REP_REGION domain-containing protein.	0.781
VE00_00965	VE00_08846	A0A1B8CMT1	A0A1B8C002	Calcineurin subunit B.	Serine/threonine-protein phosphatase.	0.998