STRINGSTRING
AMV25974.1 AMV25974.1 AMV26363.1 AMV26363.1 ydgJ_1 ydgJ_1 AMV26949.1 AMV26949.1 apbE_2 apbE_2 AMV29631.1 AMV29631.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMV25974.1Glucuronate isomerase. (419 aa)
AMV26363.13 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase. (269 aa)
ydgJ_1Putative oxidoreductase YdgJ. (338 aa)
AMV26949.1Hypothetical protein. (437 aa)
apbE_2Thiamine biosynthesis lipoprotein ApbE precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. (365 aa)
AMV29631.1Carbohydrate-selective porin, OprB family; Belongs to the OprB family. (478 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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