(6 nodes) Mixed, incl. Lipoxygenase, and Endomembrane system network (Gemmata sp. SHPL17)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMV24770.1	Leucine Rich repeats (2 copies). (483 aa)
	lox_1	Linoleate 9/13-lipoxygenase precursor. (588 aa)
	AMV27259.1	Kua-ubiquitin conjugating enzyme hybrid localization domain protein. (389 aa)
	AMV27486.1	Leucine Rich repeats (2 copies). (176 aa)
	lox_2	Linoleate 9/13-lipoxygenase precursor. (603 aa)
	AMV30028.1	Leucine Rich repeats (2 copies). (482 aa)

Your Current Organism:

Gemmata sp. SHPL17

NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMV24770.1	AMV27259.1	VT84_10265	VT84_22850	Leucine Rich repeats (2 copies).	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	0.577
AMV24770.1	AMV27486.1	VT84_10265	VT84_24005	Leucine Rich repeats (2 copies).	Leucine Rich repeats (2 copies).	0.734
AMV24770.1	lox_1	VT84_10265	VT84_11305	Leucine Rich repeats (2 copies).	Linoleate 9/13-lipoxygenase precursor.	0.560
AMV24770.1	lox_2	VT84_10265	VT84_28760	Leucine Rich repeats (2 copies).	Linoleate 9/13-lipoxygenase precursor.	0.586
AMV27259.1	AMV24770.1	VT84_22850	VT84_10265	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	Leucine Rich repeats (2 copies).	0.577
AMV27259.1	AMV27486.1	VT84_22850	VT84_24005	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	Leucine Rich repeats (2 copies).	0.625
AMV27259.1	AMV30028.1	VT84_22850	VT84_36885	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	Leucine Rich repeats (2 copies).	0.734
AMV27259.1	lox_1	VT84_22850	VT84_11305	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	Linoleate 9/13-lipoxygenase precursor.	0.726
AMV27259.1	lox_2	VT84_22850	VT84_28760	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	Linoleate 9/13-lipoxygenase precursor.	0.731
AMV27486.1	AMV24770.1	VT84_24005	VT84_10265	Leucine Rich repeats (2 copies).	Leucine Rich repeats (2 copies).	0.734
AMV27486.1	AMV27259.1	VT84_24005	VT84_22850	Leucine Rich repeats (2 copies).	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	0.625
AMV27486.1	lox_1	VT84_24005	VT84_11305	Leucine Rich repeats (2 copies).	Linoleate 9/13-lipoxygenase precursor.	0.638
AMV27486.1	lox_2	VT84_24005	VT84_28760	Leucine Rich repeats (2 copies).	Linoleate 9/13-lipoxygenase precursor.	0.658
AMV30028.1	AMV27259.1	VT84_36885	VT84_22850	Leucine Rich repeats (2 copies).	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	0.734
AMV30028.1	lox_1	VT84_36885	VT84_11305	Leucine Rich repeats (2 copies).	Linoleate 9/13-lipoxygenase precursor.	0.469
AMV30028.1	lox_2	VT84_36885	VT84_28760	Leucine Rich repeats (2 copies).	Linoleate 9/13-lipoxygenase precursor.	0.493
lox_1	AMV24770.1	VT84_11305	VT84_10265	Linoleate 9/13-lipoxygenase precursor.	Leucine Rich repeats (2 copies).	0.560
lox_1	AMV27259.1	VT84_11305	VT84_22850	Linoleate 9/13-lipoxygenase precursor.	Kua-ubiquitin conjugating enzyme hybrid localization domain protein.	0.726
lox_1	AMV27486.1	VT84_11305	VT84_24005	Linoleate 9/13-lipoxygenase precursor.	Leucine Rich repeats (2 copies).	0.638
lox_1	AMV30028.1	VT84_11305	VT84_36885	Linoleate 9/13-lipoxygenase precursor.	Leucine Rich repeats (2 copies).	0.469