STRINGSTRING
AMV22764.1 AMV22764.1 AMV22909.1 AMV22909.1 AMV22910.1 AMV22910.1 AMV22911.1 AMV22911.1 AMV22912.1 AMV22912.1 AMV22933.1 AMV22933.1 AMV22935.1 AMV22935.1 aphA aphA AMV23075.1 AMV23075.1 AMV23230.1 AMV23230.1 AMV23275.1 AMV23275.1 pknB_4 pknB_4 AMV23516.1 AMV23516.1 AMV23535.1 AMV23535.1 AMV23557.1 AMV23557.1 AMV23558.1 AMV23558.1 AMV23667.1 AMV23667.1 AMV23670.1 AMV23670.1 ftsH_1 ftsH_1 sigM_1 sigM_1 rpoA_1 rpoA_1 AMV23990.1 AMV23990.1 AMV23992.1 AMV23992.1 afsR_1 afsR_1 AMV23994.1 AMV23994.1 AMV23995.1 AMV23995.1 traI_1 traI_1 AMV23997.1 AMV23997.1 AMV23998.1 AMV23998.1 inlA_2 inlA_2 smc_4 smc_4 AMV24301.1 AMV24301.1 sigE_14 sigE_14 AMV24421.1 AMV24421.1 ftsH_2 ftsH_2 AMV24830.1 AMV24830.1 AMV24910.1 AMV24910.1 dinG_1 dinG_1 AMV24949.1 AMV24949.1 dinG_2 dinG_2 sigE_23 sigE_23 AMV25405.1 AMV25405.1 AMV25406.1 AMV25406.1 AMV25414.1 AMV25414.1 AMV25599.1 AMV25599.1 AMV25749.1 AMV25749.1 prkC_20 prkC_20 AMV25906.1 AMV25906.1 sigW_8 sigW_8 AMV26186.1 AMV26186.1 AMV26328.1 AMV26328.1 acuC acuC sigW_9 sigW_9 AMV26355.1 AMV26355.1 AMV26404.1 AMV26404.1 afsR_3 afsR_3 AMV26615.1 AMV26615.1 sigE_35 sigE_35 AMV26993.1 AMV26993.1 sigW_11 sigW_11 nhaA nhaA rps1 rps1 AMV27341.1 AMV27341.1 AMV27426.1 AMV27426.1 sigE_42 sigE_42 pipB2_1 pipB2_1 AMV27628.1 AMV27628.1 sigE_43 sigE_43 AMV27758.1 AMV27758.1 sigE_44 sigE_44 mec mec AMV27858.1 AMV27858.1 AMV27958.1 AMV27958.1 AMV27973.1 AMV27973.1 AMV28069.1 AMV28069.1 AMV28133.1 AMV28133.1 AMV28307.1 AMV28307.1 AMV28371.1 AMV28371.1 AMV28432.1 AMV28432.1 AMV28569.1 AMV28569.1 sigE_49 sigE_49 AMV28703.1 AMV28703.1 rapA_1 rapA_1 AMV28736.1 AMV28736.1 AMV28827.1 AMV28827.1 AMV28843.1 AMV28843.1 AMV29090.1 AMV29090.1 rpoZ rpoZ AMV29237.1 AMV29237.1 AMV29238.1 AMV29238.1 AMV29355.1 AMV29355.1 alaS_1 alaS_1 alaS_2 alaS_2 AMV29388.1 AMV29388.1 AMV29439.1 AMV29439.1 AMV29444.1 AMV29444.1 AMV29506.1 AMV29506.1 AMV29507.1 AMV29507.1 AMV29525.1 AMV29525.1 AMV29528.1 AMV29528.1 AMV29564.1 AMV29564.1 rapA_2 rapA_2 AMV29815.1 AMV29815.1 AMV29816.1 AMV29816.1 AMV29872.1 AMV29872.1 AMV29899.1 AMV29899.1 AMV30029.1 AMV30029.1 AMV30205.1 AMV30205.1 AMV30294.1 AMV30294.1 sigE_63 sigE_63
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMV22764.1WD domain, G-beta repeat. (779 aa)
AMV22909.1WD domain, G-beta repeat. (233 aa)
AMV22910.1WD domain, G-beta repeat. (316 aa)
AMV22911.1WD domain, G-beta repeat. (307 aa)
AMV22912.1WD domain, G-beta repeat. (287 aa)
AMV22933.1Ankyrin repeats (3 copies). (235 aa)
AMV22935.1WD domain, G-beta repeat. (498 aa)
aphAAcetylpolyamine aminohydrolase. (341 aa)
AMV23075.1WD domain, G-beta repeat. (405 aa)
AMV23230.1WD domain, G-beta repeat. (305 aa)
AMV23275.1Hypothetical protein. (174 aa)
pknB_4Serine/threonine-protein kinase PknB. (1150 aa)
AMV23516.1WD domain, G-beta repeat. (532 aa)
AMV23535.1Hypothetical protein. (339 aa)
AMV23557.1Hypothetical protein. (88 aa)
AMV23558.1Hypothetical protein. (257 aa)
AMV23667.1WD domain, G-beta repeat. (333 aa)
AMV23670.1WD domain, G-beta repeat. (621 aa)
ftsH_1ATP-dependent zinc metalloprotease FtsH. (451 aa)
sigM_1ECF RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. (1106 aa)
rpoA_1DNA-directed RNA polymerase subunit alpha. (520 aa)
AMV23990.1Hypothetical protein. (96 aa)
AMV23992.1Hypothetical protein. (170 aa)
afsR_1Regulatory protein AfsR. (858 aa)
AMV23994.15'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. (816 aa)
AMV23995.1Hypothetical protein. (113 aa)
traI_1Multifunctional conjugation protein TraI. (310 aa)
AMV23997.1Hypothetical protein. (62 aa)
AMV23998.1Hypothetical protein. (77 aa)
inlA_2Internalin-A precursor. (936 aa)
smc_4Chromosome partition protein Smc. (710 aa)
AMV24301.1Vault protein inter-alpha-trypsin. (855 aa)
sigE_14ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (1181 aa)
AMV24421.1WD domain, G-beta repeat. (684 aa)
ftsH_2ATP-dependent zinc metalloprotease FtsH. (387 aa)
AMV24830.1WD domain, G-beta repeat. (1168 aa)
AMV24910.1WD domain, G-beta repeat. (327 aa)
dinG_1Putative ATP-dependent helicase DinG. (106 aa)
AMV24949.1Hypothetical protein. (74 aa)
dinG_2Putative ATP-dependent helicase DinG. (677 aa)
sigE_23ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (793 aa)
AMV25405.1WD domain, G-beta repeat. (640 aa)
AMV25406.1WD domain, G-beta repeat. (397 aa)
AMV25414.1WD domain, G-beta repeat. (481 aa)
AMV25599.1Ankyrin repeat protein. (171 aa)
AMV25749.1CHAT domain protein. (1251 aa)
prkC_20Serine/threonine-protein kinase PrkC. (623 aa)
AMV25906.1Translocation protein TolB. (365 aa)
sigW_8ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. (1174 aa)
AMV26186.1WD domain, G-beta repeat. (556 aa)
AMV26328.1WD domain, G-beta repeat. (299 aa)
acuCAcetoin utilization protein AcuC. (350 aa)
sigW_9ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)
AMV26355.1WD domain, G-beta repeat. (624 aa)
AMV26404.1Hypothetical protein. (356 aa)
afsR_3Regulatory protein AfsR. (608 aa)
AMV26615.1Translocation protein TolB. (815 aa)
sigE_35ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (1104 aa)
AMV26993.1SET domain protein. (124 aa)
sigW_11ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. (1037 aa)
nhaANa(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (453 aa)
rps130S ribosomal protein S1. (1092 aa)
AMV27341.1WD domain, G-beta repeat. (362 aa)
AMV27426.1Ankyrin repeats (3 copies). (148 aa)
sigE_42ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (947 aa)
pipB2_1Secreted effector protein pipB2. (931 aa)
AMV27628.1Translocation protein TolB. (321 aa)
sigE_43ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (1086 aa)
AMV27758.1Hypothetical protein. (190 aa)
sigE_44ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (1116 aa)
mecCysO-cysteine peptidase. (142 aa)
AMV27858.1Ankyrin repeats (3 copies). (211 aa)
AMV27958.1Translocation protein TolB. (352 aa)
AMV27973.1WD domain, G-beta repeat. (617 aa)
AMV28069.1WD domain, G-beta repeat. (986 aa)
AMV28133.1Hypothetical protein. (118 aa)
AMV28307.1WD domain, G-beta repeat. (334 aa)
AMV28371.1Ankyrin repeats (3 copies). (194 aa)
AMV28432.1WD domain, G-beta repeat. (1708 aa)
AMV28569.1Ankyrin repeats (3 copies). (180 aa)
sigE_49ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (997 aa)
AMV28703.1Hypothetical protein. (278 aa)
rapA_1RNA polymerase-associated protein RapA. (894 aa)
AMV28736.1WD domain, G-beta repeat. (304 aa)
AMV28827.1Type III restriction enzyme, res subunit. (525 aa)
AMV28843.1WD domain, G-beta repeat. (359 aa)
AMV29090.1WD domain, G-beta repeat. (884 aa)
rpoZDNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (103 aa)
AMV29237.1Hypothetical protein. (182 aa)
AMV29238.1ATP-dependent helicase HepA. (688 aa)
AMV29355.1WD domain, G-beta repeat. (1231 aa)
alaS_1Alanine--tRNA ligase. (302 aa)
alaS_2Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family. (715 aa)
AMV29388.1WD domain, G-beta repeat. (293 aa)
AMV29439.1WD domain, G-beta repeat. (499 aa)
AMV29444.1WD domain, G-beta repeat. (369 aa)
AMV29506.1WD40-like Beta Propeller Repeat protein. (311 aa)
AMV29507.1WD domain, G-beta repeat. (292 aa)
AMV29525.1Hypothetical protein. (695 aa)
AMV29528.1Type III restriction enzyme, res subunit. (604 aa)
AMV29564.1Hypothetical protein. (68 aa)
rapA_2RNA polymerase-associated protein RapA. (807 aa)
AMV29815.1Hypothetical protein. (388 aa)
AMV29816.1Translocation protein TolB. (352 aa)
AMV29872.1Ankyrin repeats (3 copies). (342 aa)
AMV29899.1NLI interacting factor-like phosphatase. (145 aa)
AMV30029.1Translocation protein TolB. (302 aa)
AMV30205.1Hypothetical protein. (196 aa)
AMV30294.1Translocation protein TolB. (367 aa)
sigE_63ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. (611 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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