STRINGSTRING
nlpI nlpI yrrB_1 yrrB_1 AMV25173.1 AMV25173.1 AMV25999.1 AMV25999.1 AMV26747.1 AMV26747.1 AMV26748.1 AMV26748.1 yrrB_2 yrrB_2 AMV28669.1 AMV28669.1 AMV29245.1 AMV29245.1 AMV29947.1 AMV29947.1 AMV30019.1 AMV30019.1 yrrB_3 yrrB_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nlpILipoprotein NlpI precursor. (293 aa)
yrrB_1TPR repeat-containing protein YrrB. (520 aa)
AMV25173.1Lipoprotein NlpI. (616 aa)
AMV25999.1Hypothetical protein. (354 aa)
AMV26747.1Tetratricopeptide repeat protein. (272 aa)
AMV26748.1Hypothetical protein. (291 aa)
yrrB_2TPR repeat-containing protein YrrB. (439 aa)
AMV28669.1Putative CtpA-like serine protease; Belongs to the peptidase S41A family. (870 aa)
AMV29245.1Hypothetical protein. (195 aa)
AMV29947.1Bacteriophage N4 receptor, outer membrane subunit. (358 aa)
AMV30019.1Lipoprotein NlpI. (417 aa)
yrrB_3TPR repeat-containing protein YrrB. (677 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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