STRINGSTRING
AMV23119.1 AMV23119.1 AMV25452.1 AMV25452.1 AMV27635.1 AMV27635.1 agaA agaA AMV27742.1 AMV27742.1 AMV28983.1 AMV28983.1 AMV29000.1 AMV29000.1 AMV29225.1 AMV29225.1 AMV29459.1 AMV29459.1 AMV29460.1 AMV29460.1 smc_6 smc_6 AMV29951.1 AMV29951.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMV23119.1Hypothetical protein. (433 aa)
AMV25452.1Hypothetical protein. (801 aa)
AMV27635.1PQQ enzyme repeat protein. (602 aa)
agaABeta-agarase A precursor. (916 aa)
AMV27742.1Anaphase-promoting complex, cyclosome, subunit 3. (1452 aa)
AMV28983.1Hypothetical protein. (1084 aa)
AMV29000.1Tetratricopeptide repeat protein. (751 aa)
AMV29225.1Hypothetical protein. (1577 aa)
AMV29459.1Hypothetical protein. (1626 aa)
AMV29460.1Cna protein B-type domain protein. (1560 aa)
smc_6Chromosome partition protein Smc. (518 aa)
AMV29951.1Tetratricopeptide repeat protein. (1713 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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