Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| garD | gndA_1 | VT84_22550 | VT84_00710 | D-galactarate dehydratase. | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.803 |
| garD | gndA_2 | VT84_22550 | VT84_17730 | D-galactarate dehydratase. | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating. | 0.800 |
| garD | gno | VT84_22550 | VT84_33950 | D-galactarate dehydratase. | Gluconate 5-dehydrogenase. | 0.901 |
| garD | kdgA | VT84_22550 | VT84_27000 | D-galactarate dehydratase. | KHG/KDPG aldolase. | 0.519 |
| garD | kdgK_1 | VT84_22550 | VT84_00230 | D-galactarate dehydratase. | 2-dehydro-3-deoxygluconokinase. | 0.885 |
| garD | kdgK_2 | VT84_22550 | VT84_26995 | D-galactarate dehydratase. | 2-dehydro-3-deoxygluconokinase. | 0.895 |
| garD | rpe | VT84_22550 | VT84_04550 | D-galactarate dehydratase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.801 |
| garD | rpiA | VT84_22550 | VT84_26370 | D-galactarate dehydratase. | Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.800 |
| garD | ywlF | VT84_22550 | VT84_33350 | D-galactarate dehydratase. | Putative sugar phosphate isomerase YwlF. | 0.816 |
| gndA_1 | garD | VT84_00710 | VT84_22550 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | D-galactarate dehydratase. | 0.803 |
| gndA_1 | gndA_2 | VT84_00710 | VT84_17730 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating. | 0.917 |
| gndA_1 | gno | VT84_00710 | VT84_33950 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Gluconate 5-dehydrogenase. | 0.817 |
| gndA_1 | gntK | VT84_00710 | VT84_37360 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Thermoresistant gluconokinase. | 0.993 |
| gndA_1 | pgl_1 | VT84_00710 | VT84_03685 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 6-phosphogluconolactonase. | 0.918 |
| gndA_1 | pgl_2 | VT84_00710 | VT84_31810 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 6-phosphogluconolactonase. | 0.918 |
| gndA_1 | rpe | VT84_00710 | VT84_04550 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.941 |
| gndA_1 | rpiA | VT84_00710 | VT84_26370 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.927 |
| gndA_1 | ywlF | VT84_00710 | VT84_33350 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Putative sugar phosphate isomerase YwlF. | 0.925 |
| gndA_1 | zwf_1 | VT84_00710 | VT84_17385 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Glucose-6-phosphate 1-dehydrogenase. | 0.928 |
| gndA_1 | zwf_2 | VT84_00710 | VT84_25470 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.960 |
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