STRINGSTRING
linC_1 linC_1 linC_2 linC_2 srlD srlD ybjJ ybjJ glpR glpR fabH_1 fabH_1 fabG_1 fabG_1 AMV23299.1 AMV23299.1 AMV23301.1 AMV23301.1 lvr_1 lvr_1 fabG_3 fabG_3 ttuB ttuB AMV23388.1 AMV23388.1 AMV23389.1 AMV23389.1 fabG_4 fabG_4 ydfG ydfG fabH_2 fabH_2 AMV24246.1 AMV24246.1 gdhI gdhI AMV24248.1 AMV24248.1 AMV24249.1 AMV24249.1 AMV24250.1 AMV24250.1 AMV24251.1 AMV24251.1 AMV24346.1 AMV24346.1 AMV24405.1 AMV24405.1 fabD_1 fabD_1 fabG_6 fabG_6 accD accD uxuB uxuB AMV25293.1 AMV25293.1 AMV25294.1 AMV25294.1 kduD kduD AMV25744.1 AMV25744.1 fabG_7 fabG_7 fabF_1 fabF_1 sadH_1 sadH_1 AMV25911.1 AMV25911.1 yliI_1 yliI_1 AMV26257.1 AMV26257.1 psf-1 psf-1 accA accA fabH_3 fabH_3 desA1 desA1 fabZ_1 fabZ_1 fabG_9 fabG_9 ycdF_1 ycdF_1 comR comR sadH_2 sadH_2 AMV28517.1 AMV28517.1 fabF_2 fabF_2 fabF_3 fabF_3 fabG_11 fabG_11 fabI fabI AMV28685.1 AMV28685.1 pqsD pqsD fabA fabA pksL pksL fenF fenF pksJ pksJ pksE pksE AMV29178.1 AMV29178.1 AMV29180.1 AMV29180.1 AMV29183.1 AMV29183.1 qorA_2 qorA_2 fabD_2 fabD_2 fabF_4 fabF_4 AMV30383.1 AMV30383.1 AMV30384.1 AMV30384.1 accB accB accC accC fabF_5 fabF_5 fabF_6 fabF_6 fabZ_2 fabZ_2 fabG_13 fabG_13 fabZ_3 fabZ_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
linC_12,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase. (104 aa)
linC_22,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase. (148 aa)
srlDSorbitol-6-phosphate 2-dehydrogenase. (263 aa)
ybjJInner membrane protein YbjJ. (600 aa)
glpRGlycerol-3-phosphate regulon repressor. (254 aa)
fabH_13-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (333 aa)
fabG_13-oxoacyl-[acyl-carrier-protein] reductase FabG. (434 aa)
AMV23299.1Hypothetical protein. (74 aa)
AMV23301.1Hypothetical protein. (170 aa)
lvr_1Levodione reductase. (252 aa)
fabG_33-oxoacyl-[acyl-carrier-protein] reductase FabG. (260 aa)
ttuBPutative tartrate transporter. (443 aa)
AMV23388.1Hypothetical protein. (30 aa)
AMV23389.1Hypothetical protein. (335 aa)
fabG_43-oxoacyl-[acyl-carrier-protein] reductase FabG. (250 aa)
ydfGNADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)
fabH_23-oxoacyl-[acyl-carrier-protein] synthase 3. (623 aa)
AMV24246.1Hypothetical protein. (239 aa)
gdhIGlucose 1-dehydrogenase 1. (251 aa)
AMV24248.1Hypothetical protein. (154 aa)
AMV24249.1Transposase DDE domain protein. (281 aa)
AMV24250.1Hypothetical protein. (376 aa)
AMV24251.1Hypothetical protein. (355 aa)
AMV24346.1Putative O-methyltransferase. (224 aa)
AMV24405.1Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. (2530 aa)
fabD_1Malonyl CoA-acyl carrier protein transacylase. (1114 aa)
fabG_63-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (272 aa)
uxuBPutative oxidoreductase UxuB. (269 aa)
AMV25293.1Hypothetical protein. (345 aa)
AMV25294.1Hypothetical protein. (341 aa)
kduD2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (221 aa)
AMV25744.1Hypothetical protein. (485 aa)
fabG_73-oxoacyl-[acyl-carrier-protein] reductase FabG. (234 aa)
fabF_13-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (430 aa)
sadH_1Putative oxidoreductase SadH; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)
AMV25911.1Glucose 1-dehydrogenase. (248 aa)
yliI_1Soluble aldose sugar dehydrogenase YliI precursor. (650 aa)
AMV26257.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)
psf-14'-phosphopantetheinyl transferase psf-1; Belongs to the P-Pant transferase superfamily. (252 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa)
fabH_33-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (339 aa)
desA1Putative acyl-[acyl-carrier-protein] desaturase desA1. (263 aa)
fabZ_13-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ. (169 aa)
fabG_93-oxoacyl-[acyl-carrier-protein] reductase FabG. (247 aa)
ycdF_1Glucose 1-dehydrogenase 2. (249 aa)
comRHTH-type transcriptional repressor ComR. (195 aa)
sadH_2Putative oxidoreductase SadH; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)
AMV28517.1Fatty acid desaturase. (274 aa)
fabF_23-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (439 aa)
fabF_33-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (430 aa)
fabG_113-oxoacyl-[acyl-carrier-protein] reductase FabG. (254 aa)
fabIEnoyl-[acyl-carrier-protein] reductase [NADH] FabI. (293 aa)
AMV28685.1Hypothetical protein. (72 aa)
pqsDPQB biosynthetic 3-oxoacyl-[acyl-carrier-protein] synthase III. (385 aa)
fabA3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase. (1450 aa)
pksLPolyketide synthase PksL; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (761 aa)
fenFMalonyl CoA-acyl carrier protein transacylase. (1676 aa)
pksJPolyketide synthase PksJ; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (592 aa)
pksEPolyketide biosynthesis protein PksE. (551 aa)
AMV29178.1Hypothetical protein. (147 aa)
AMV29180.1Hypothetical protein. (188 aa)
AMV29183.1Hypothetical protein. (370 aa)
qorA_2Quinone oxidoreductase 1. (332 aa)
fabD_2Malonyl CoA-acyl carrier protein transacylase. (302 aa)
fabF_43-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (430 aa)
AMV30383.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)
AMV30384.1Hypothetical protein. (34 aa)
accBBiotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (177 aa)
accCBiotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (450 aa)
fabF_53-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (429 aa)
fabF_63-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (423 aa)
fabZ_23-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ. (162 aa)
fabG_133-oxoacyl-[acyl-carrier-protein] reductase FabG. (254 aa)
fabZ_33-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ. (163 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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