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ribD ribD dhaT_1 dhaT_1 tuaD tuaD mdh mdh yahK yahK xylB_1 xylB_1 zwf_1 zwf_1 gndA_2 gndA_2 ilvC ilvC AMV26671.1 AMV26671.1 dhaT_2 dhaT_2 rmlD rmlD hisD hisD murB murB wbpA wbpA zwf_2 zwf_2 ldh_2 ldh_2 egsA egsA serA_1 serA_1 gutB gutB serA_2 serA_2 panE panE icd_2 icd_2 hicd hicd icd_3 icd_3 serA_3 serA_3 AMV29635.1 AMV29635.1 AMV29781.1 AMV29781.1 hom hom AMV30217.1 AMV30217.1 dmlA dmlA ghrB ghrB fadJ_1 fadJ_1 dxr dxr ahr ahr yjjN yjjN gndA_1 gndA_1 gpsA gpsA fdm fdm fadJ_2 fadJ_2 tkrA tkrA icd_1 icd_1 guaB guaB pdxA2 pdxA2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
ribDRiboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (363 aa)
dhaT_11,3-propanediol dehydrogenase. (402 aa)
tuaDUDP-glucose 6-dehydrogenase TuaD. (443 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (329 aa)
yahKAldehyde reductase YahK. (353 aa)
xylB_1Aryl-alcohol dehydrogenase. (346 aa)
zwf_1Glucose-6-phosphate 1-dehydrogenase. (150 aa)
gndA_26-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating. (339 aa)
ilvCKetol-acid reductoisomerase. (349 aa)
AMV26671.1Putative 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)
dhaT_21,3-propanediol dehydrogenase. (368 aa)
rmlDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (290 aa)
hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (474 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (292 aa)
wbpAUDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (439 aa)
zwf_2Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (480 aa)
ldh_2L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (319 aa)
egsAGlycerol-1-phosphate dehydrogenase [NAD(P)+]. (349 aa)
serA_1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (337 aa)
gutBSorbitol dehydrogenase. (344 aa)
serA_2D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (539 aa)
panE2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (314 aa)
icd_2Isocitrate dehydrogenase [NADP]. (340 aa)
hicdHomoisocitrate dehydrogenase. (91 aa)
icd_3Isocitrate dehydrogenase [NADP]. (234 aa)
serA_3D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa)
AMV29635.1Hypothetical protein. (399 aa)
AMV29781.1Alcohol dehydrogenase. (395 aa)
homHomoserine dehydrogenase. (467 aa)
AMV30217.1Hypothetical protein. (203 aa)
dmlAD-malate dehydrogenase. (354 aa)
ghrBGlyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)
fadJ_1Fatty acid oxidation complex subunit alpha. (293 aa)
dxr1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (417 aa)
ahrAldehyde reductase Ahr. (338 aa)
yjjNPutative L-galactonate oxidoreductase. (342 aa)
gndA_16-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (490 aa)
gpsAGlycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (332 aa)
fdmFormaldehyde dismutase. (391 aa)
fadJ_2Fatty acid oxidation complex subunit alpha. (279 aa)
tkrAGlyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (308 aa)
icd_1Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (404 aa)
guaBInosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (497 aa)
pdxA24-hydroxythreonine-4-phosphate dehydrogenase 2; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). (335 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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