STRINGSTRING
nanM_2 nanM_2 wbpI wbpI AMV27779.1 AMV27779.1 pgm_2 pgm_2 AMV27848.1 AMV27848.1 rpiA rpiA AMV28023.1 AMV28023.1 nnr_1 nnr_1 rluC_2 rluC_2 ino1 ino1 prsA1 prsA1 AMV28455.1 AMV28455.1 AMV28528.1 AMV28528.1 tig tig pgi_1 pgi_1 AMV28574.1 AMV28574.1 groL1_2 groL1_2 purE purE gmuF gmuF prsA2 prsA2 galE_2 galE_2 truA truA pheA pheA pgk/tpi pgk/tpi AMV29217.1 AMV29217.1 nnr_2 nnr_2 rluA rluA ywlF ywlF prsA_2 prsA_2 pgi_2 pgi_2 hyi_2 hyi_2 prsA_3 prsA_3 nagB nagB fbp_2 fbp_2 fbp_3 fbp_3 AMV30235.1 AMV30235.1 gyrB_3 gyrB_3 queA queA AMV30329.1 AMV30329.1 AMV30376.1 AMV30376.1 AMV30369.1 AMV30369.1 AMV22780.1 AMV22780.1 AMV22803.1 AMV22803.1 AMV22831.1 AMV22831.1 AMV22978.1 AMV22978.1 gyrA_1 gyrA_1 xylA xylA fbp_1 fbp_1 truD_1 truD_1 AMV23303.1 AMV23303.1 mro mro rpe rpe groL5 groL5 groL groL AMV23940.1 AMV23940.1 gmhA1 gmhA1 groL1_1 groL1_1 AMV24277.1 AMV24277.1 rfbC rfbC truD_2 truD_2 AMV24687.1 AMV24687.1 AMV24698.1 AMV24698.1 trpF trpF hyi_1 hyi_1 AMV24789.1 AMV24789.1 AMV24847.1 AMV24847.1 AMV24891.1 AMV24891.1 truB truB hisA_1 hisA_1 AMV25042.1 AMV25042.1 AMV25404.1 AMV25404.1 shc_1 shc_1 rluD_1 rluD_1 topA topA AMV25787.1 AMV25787.1 rfbD rfbD treY treY rluB rluB prsA_1 prsA_1 AMV25974.1 AMV25974.1 rluD_2 rluD_2 hemL hemL algC algC pgm_1 pgm_1 AMV26459.1 AMV26459.1 AMV26468.1 AMV26468.1 pgcA pgcA AMV26526.1 AMV26526.1 galM galM gmhA gmhA AMV26601.1 AMV26601.1 gyrB_1 gyrB_1 gyrA_2 gyrA_2 shc_2 shc_2 trpC trpC dapF dapF rluC_1 rluC_1 AMV26809.1 AMV26809.1 hisA_2 hisA_2 ppiA ppiA hemL1 hemL1 shc_3 shc_3 AMV27019.1 AMV27019.1 rluD_3 rluD_3 nanM_1 nanM_1 gyrB_2 gyrB_2 AMV27344.1 AMV27344.1 AMV27497.1 AMV27497.1
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
nanM_2N-acetylneuraminate epimerase. (336 aa)
wbpIUDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (356 aa)
AMV27779.1Hypothetical protein; YTV. (603 aa)
pgm_2Phosphoglucomutase. (548 aa)
AMV27848.1Neutral/alkaline non-lysosomal ceramidase. (477 aa)
rpiARibose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (230 aa)
AMV28023.1Prenyltransferase and squalene oxidase repeat protein. (378 aa)
nnr_1Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (218 aa)
rluC_2Ribosomal large subunit pseudouridine synthase C. (249 aa)
ino1Inositol-3-phosphate synthase. (399 aa)
prsA1Foldase protein PrsA 1 precursor. (374 aa)
AMV28455.1Prenyltransferase and squalene oxidase repeat protein. (330 aa)
AMV28528.1Hypothetical protein. (377 aa)
tigTrigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (509 aa)
pgi_1Glucose-6-phosphate isomerase. (501 aa)
AMV28574.1Cofactor-independent phosphoglycerate mutase. (401 aa)
groL1_260 kDa chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (545 aa)
purEN5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (182 aa)
gmuFPutative mannose-6-phosphate isomerase GmuF. (363 aa)
prsA2Foldase protein PrsA 2 precursor. (445 aa)
galE_2UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (327 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (250 aa)
pheAPrephenate dehydratase. (377 aa)
pgk/tpiBifunctional PGK/TIM; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (254 aa)
AMV29217.1Chaperonin GroEL. (321 aa)
nnr_2Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. (290 aa)
rluARibosomal large subunit pseudouridine synthase A. (229 aa)
ywlFPutative sugar phosphate isomerase YwlF. (155 aa)
prsA_2Foldase protein PrsA. (340 aa)
pgi_2Glucose-6-phosphate isomerase; Belongs to the GPI family. (544 aa)
hyi_2Hydroxypyruvate isomerase; Belongs to the hyi family. (295 aa)
prsA_3Foldase protein PrsA precursor. (408 aa)
nagBGlucosamine-6-phosphate deaminase. (644 aa)
fbp_2FK506-binding protein. (147 aa)
fbp_3FK506-binding protein. (146 aa)
AMV30235.1Hypothetical protein. (256 aa)
gyrB_3DNA gyrase subunit B. (823 aa)
queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (342 aa)
AMV30329.1Hypothetical protein. (386 aa)
AMV30376.1Peptidyl-prolyl cis-trans isomerase cyp18. (705 aa)
AMV30369.1Hypothetical protein; YTV. (654 aa)
AMV22780.1Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. (69 aa)
AMV22803.1Putative FKBP-type peptidyl-prolyl cis-trans isomerase. (315 aa)
AMV22831.1Cofactor-independent phosphoglycerate mutase. (404 aa)
AMV22978.1Prenyltransferase and squalene oxidase repeat protein. (331 aa)
gyrA_1DNA gyrase subunit A. (904 aa)
xylAXylose isomerase; Belongs to the xylose isomerase family. (437 aa)
fbp_1FK506-binding protein. (124 aa)
truD_1tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (357 aa)
AMV23303.1Hypothetical protein. (399 aa)
mroAldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. (386 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (222 aa)
groL560 kDa chaperonin 5; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (581 aa)
groL60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (561 aa)
AMV23940.1Eukaryotic DNA topoisomerase I, catalytic core. (347 aa)
gmhA1Phosphoheptose isomerase 1. (206 aa)
groL1_160 kDa chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (644 aa)
AMV24277.1Hypothetical protein. (332 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (177 aa)
truD_2tRNA pseudouridine synthase D. (391 aa)
AMV24687.1Neutral/alkaline non-lysosomal ceramidase. (462 aa)
AMV24698.1Hypothetical protein. (848 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (217 aa)
hyi_1Hydroxypyruvate isomerase. (308 aa)
AMV24789.1Neutral/alkaline non-lysosomal ceramidase. (469 aa)
AMV24847.1Tautomerase enzyme. (129 aa)
AMV24891.1Peptidyl-prolyl cis-trans isomerase cyp18; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (193 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (288 aa)
hisA_11-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Belongs to the HisA/HisF family. (252 aa)
AMV25042.1Hypothetical protein. (416 aa)
AMV25404.1Hypothetical protein. (340 aa)
shc_1Squalene--hopene cyclase. (590 aa)
rluD_1Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (286 aa)
topADNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (986 aa)
AMV25787.1Hypothetical protein. (177 aa)
rfbDUDP-galactopyranose mutase precursor. (384 aa)
treYMaltooligosyl trehalose synthase. (994 aa)
rluBRibosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (262 aa)
prsA_1Foldase protein PrsA precursor. (326 aa)
AMV25974.1Glucuronate isomerase. (419 aa)
rluD_2Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (323 aa)
hemLGlutamate-1-semialdehyde 2,1-aminomutase. (435 aa)
algCPhosphomannomutase/phosphoglucomutase. (450 aa)
pgm_1Phosphoglucomutase. (546 aa)
AMV26459.1Prenyltransferase and squalene oxidase repeat protein. (391 aa)
AMV26468.1Hypothetical protein. (389 aa)
pgcAPhosphoglucomutase. (656 aa)
AMV26526.1Neutral/alkaline non-lysosomal ceramidase. (1419 aa)
galMAldose 1-epimerase. (344 aa)
gmhAPhosphoheptose isomerase. (196 aa)
AMV26601.1dTDP-4-dehydrorhamnose 3,5-epimerase. (164 aa)
gyrB_1DNA gyrase subunit B. (648 aa)
gyrA_2DNA gyrase subunit A. (784 aa)
shc_2Squalene--hopene cyclase. (609 aa)
trpCIndole-3-glycerol phosphate synthase; Belongs to the TrpC family. (260 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (286 aa)
rluC_1Ribosomal large subunit pseudouridine synthase C. (375 aa)
AMV26809.1Hypothetical protein. (359 aa)
hisA_21-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (240 aa)
ppiAPeptidyl-prolyl cis-trans isomerase A precursor; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (194 aa)
hemL1Glutamate-1-semialdehyde 2,1-aminomutase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (457 aa)
shc_3Squalene--hopene cyclase. (620 aa)
AMV27019.14-hydroxyproline epimerase; Belongs to the proline racemase family. (309 aa)
rluD_3Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (349 aa)
nanM_1N-acetylneuraminate epimerase. (338 aa)
gyrB_2DNA gyrase subunit B. (384 aa)
AMV27344.1Neutral ceramidase. (465 aa)
AMV27497.1Hypothetical protein. (290 aa)
Your Current Organism:
Gemmata sp. SHPL17
NCBI taxonomy Id: 1630693
Other names: G. sp. SH-PL17, Gemmata sp. SH-PL17
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